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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | C.cajan_39155 | ||||||||
| Common Name | KK1_039207 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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| Family | bZIP | ||||||||
| Protein Properties | Length: 143aa MW: 16425.7 Da PI: 10.1071 | ||||||||
| Description | bZIP family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | bZIP_1 | 34.4 | 4.7e-11 | 57 | 104 | 4 | 51 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51
++ rr+q+NRe+ArrsR RKk+ +e+L+ L +N++Lk++l +
C.cajan_39155 57 ERKRRRMQSNRESARRSRYRKKKHVENLTSQLNRLRIQNRELKNRLAS 104
57889**************************************77654 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| SMART | SM00338 | 3.1E-12 | 54 | 125 | IPR004827 | Basic-leucine zipper domain |
| Gene3D | G3DSA:1.20.5.170 | 1.6E-9 | 54 | 104 | No hit | No description |
| PROSITE profile | PS50217 | 10.657 | 56 | 103 | IPR004827 | Basic-leucine zipper domain |
| Pfam | PF00170 | 6.9E-9 | 57 | 105 | IPR004827 | Basic-leucine zipper domain |
| SuperFamily | SSF57959 | 1.29E-10 | 58 | 112 | No hit | No description |
| CDD | cd14702 | 2.11E-14 | 59 | 106 | No hit | No description |
| PROSITE pattern | PS00036 | 0 | 61 | 76 | IPR004827 | Basic-leucine zipper domain |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
| GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 143 aa Download sequence Send to blast |
MLFHEAVQLP CSDPVHEIML TESEIEDLFS LINQTRDPVS PGSGSQGSNR AVYSPEERKR 60 RRMQSNRESA RRSRYRKKKH VENLTSQLNR LRIQNRELKN RLASTMHHHL LLSLHNDHLE 120 SESVALMAKL SGLCAILGTM LSQ |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 57 | 61 | RKRRR |
| 2 | 59 | 78 | RRRMQSNRESARRSRYRKKK |
| Cis-element ? help Back to Top | |
|---|---|
| Source | Link |
| PlantRegMap | C.cajan_39155 |
| Regulation -- PlantRegMap ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Source | Upstream Regulator | Target Gene | ||||
| PlantRegMap | Retrieve | - | ||||
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| Refseq | XP_020203045.2 | 1e-100 | basic leucine zipper 4 | ||||
| TrEMBL | A0A151RA09 | 2e-99 | A0A151RA09_CAJCA; Regulatory protein opaque-2 | ||||
| STRING | GLYMA06G05111.1 | 1e-79 | (Glycine max) | ||||
| Orthologous Group ? help Back to Top | |||
|---|---|---|---|
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Fabids | OGEF5996 | 30 | 52 |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT3G49760.1 | 3e-18 | basic leucine-zipper 5 | ||||




