PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_39737
Common NameKK1_039645
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family TALE
Protein Properties Length: 610aa    MW: 67401.9 Da    PI: 7.3441
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_39737genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.72.2e-093483851954
                    HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
       Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                    Fe   ++yp+ +++  LAk++gLt +qV++WF N R +
  C.cajan_39737 348 FEHflHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVR 385
                    554459******************************88 PP
2BELL121.34.1e-39212283172
           BELL   1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                    +rqelq+kk+kL+s+l+eV++rY+qy++q+q+vi sFe++ag+g+ak+Yt+lAlk+iS++FrcLkdai++qi
  C.cajan_39737 212 QRQELQMKKSKLVSMLDEVEQRYRQYHHQMQVVITSFEQAAGVGAAKSYTALALKTISKQFRCLKDAISSQI 283
                    69*********************************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005745.8E-63134281IPR006563POX domain
PfamPF075261.4E-49139280IPR006563POX domain
PROSITE profilePS5007112.082326389IPR001356Homeobox domain
SMARTSM003897.8E-10329393IPR001356Homeobox domain
CDDcd000862.73E-12329390No hitNo description
SuperFamilySSF466894.71E-17330396IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.0E-28332396IPR009057Homeodomain-like
PfamPF059204.0E-18346385IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 610 aa     Download sequence    Send to blast
MATYFHGSTS EIPSSAEGLQ TLYLMNPNYV PYTDASQHPT QNMLLVNSNT SNTPTNALNL  60
ANFSHAPPPQ SPNNHPTENI PSNMGCVTSV AAISTQIGFH RPNQLSLSLS SQQTPYRSLS  120
GEVHAVSPAS RGGDDVHSVV LGSKYLKSTQ ELLDEVVNVG KGISKGEESM EGAKKEKMKG  180
NIESTSGVGD GSSCGGENNS GGKQGGELST AQRQELQMKK SKLVSMLDEV EQRYRQYHHQ  240
MQVVITSFEQ AAGVGAAKSY TALALKTISK QFRCLKDAIS SQIKTTSKNI GEDDCLGVKV  300
EGSRLRYVDH HLRQQHALQQ LGMIQHNAWR PQRGLPERAV SVLRAWLFEH FLHPYPKDSD  360
KVMLAKQTGL TRSQVSNWFI NARVRLWKPM VEEMYMEEVK QEQNNGSQDN NTNRSKESEA  420
NAAQESSAMR LDQNNIHQSN KAESFNNQTT SPTEISNSNM QSPNKPRSTS EMQNSPGSIV  480
DMEMKPHHGE TNTREGNTKL FGIENHHFGA FGMEDIGRFH HVTEQQLTPR FHGNGVSLTL  540
GLPHSENLSL SGTQHGFLSQ NMHLGMRTNE NEFCGAINTP PSSHSGTSYE SIDIQNRKRF  600
AAQLLRDFVA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A3e-16335393563Homeobox protein Meis2
3k2a_B3e-16335393563Homeobox protein Meis2
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_39737
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150391e-123AP015039.1 Vigna angularis var. angularis DNA, chromosome 6, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_029125190.10.0BEL1-like homeodomain protein 1
RefseqXP_029125191.10.0BEL1-like homeodomain protein 1
RefseqXP_029125192.10.0BEL1-like homeodomain protein 1
RefseqXP_029125193.10.0BEL1-like homeodomain protein 1
SwissprotQ9SJ561e-125BLH1_ARATH; BEL1-like homeodomain protein 1
TrEMBLA0A151R8X20.0A0A151R8X2_CAJCA; BEL1-like homeodomain protein 1
STRINGXP_007132496.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF16273492
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35940.31e-115BEL1-like homeodomain 1
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]