PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_39862
Common NameKK1_039901
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 355aa    MW: 40307.1 Da    PI: 7.8984
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_39862genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.93.6e-13130181155
                    CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    +r++h ++Er+RR+++N+ +  Lr+l+P++   + ++ + a+i   A++++k+L+
  C.cajan_39862 130 QRMTHIAVERNRRRQMNDHLTVLRSLMPPS---YIQRGDQASIIGGAIDFVKELE 181
                    79****************************...9******************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.39E-12128185No hitNo description
SuperFamilySSF474598.64E-17129196IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.599129180IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.4E-13130195IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.7E-10130181IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.7E-10135186IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    Send to blast
MPFLQMLQSV ESPQIFPLKE PNFQTLLRLQ HLKKPWEGLA CIPRMEAALE LESCVTHDML  60
EMQSPVKSES NELQHPLSVS CVEKVSYECN QEQHHKTAQS CPKSQPAAIR ERRKRKRTRP  120
SKNKEDVENQ RMTHIAVERN RRRQMNDHLT VLRSLMPPSY IQRGDQASII GGAIDFVKEL  180
EQLLQSLEAQ KRMRKNEEGG GGSSSQPSSL LSPHGYGVRS SSSEEMNCGD EVKAENKSEA  240
ADIKVTLIQT HVNLKIECRR RPGQLIKVIV ALEDLRLTIL HLNITSSDTS VLYSLNLKNC  300
VCFFFNMVNS TKWNQVSVLF FSDLQSKQIE EDCKLCSASD IAEAVHQIFS YINGS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1111116RRKRKR
2130141RMTHIAVERNRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_39862
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150421e-146AP015042.1 Vigna angularis var. angularis DNA, chromosome 9, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020203604.10.0transcription factor bHLH57
TrEMBLA0A151R8X10.0A0A151R8X1_CAJCA; Transcription factor bHLH70
STRINGXP_007135328.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF68943449
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46810.13e-63bHLH family protein