PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_40047
Common NameKK1_041972
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 416aa    MW: 45454.4 Da    PI: 6.4425
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_40047genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.97.1e-20224273255
            AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                    +y+GVr+++ +g+W+AeIrdp     +  +r++lg+f t+e Aa+a+++a+++++g
  C.cajan_40047 224 KYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFETEEAAARAYDEAALRFRG 273
                    8********.**********7.....337*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.106.6E-33223282IPR001471AP2/ERF domain
PROSITE profilePS5103225.725224281IPR001471AP2/ERF domain
SMARTSM003803.2E-38224287IPR001471AP2/ERF domain
SuperFamilySSF541711.9E-22224282IPR016177DNA-binding domain
PfamPF008476.7E-14224273IPR001471AP2/ERF domain
CDDcd000185.17E-21224283No hitNo description
PRINTSPR003675.5E-11225236IPR001471AP2/ERF domain
PRINTSPR003675.5E-11247263IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 416 aa     Download sequence    Send to blast
MSLLTVAHQR GSGEFIRFTA NRDGDDGNSE YGYGHDGDGG DDNNNSGVSE SLGLNFNQVM  60
QHGGVAMQGG SLASGYNRGD PEFREMVSAL THVVSSGSSQ RNIESGYPMM SGFGYASSLS  120
RFSSSSSPSP SWVGHKRGRE EAQESGSSHN LMQQQQQQQS ATRLFRNVGD FMVPSQGDSS  180
TVTEEHPTST TASSVTAIMT AVSDTAMTTV TESASSGGGE RRRKYRGVRQ RPWGKWAAEI  240
RDPHKAARVW LGTFETEEAA ARAYDEAALR FRGNRAKLNF PENPPQIQAS PDLIRDYLQY  300
SQLLQSDFQH QQQQQQQQEQ QQQRSNLLQW YYNAQLASLQ SHSLLPSSPS LSSNMSPTSF  360
PSFSTSTQLS SASFPLFSSQ QMGYLQPPEN RPPAGGRPEF PPSTWSNTSG HPPPSG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A1e-22223281160ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1219224ERRRKY
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_40047
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0310924e-86KT031092.1 Glycine max clone HN_CCL_185 AP2-EREBP transcription factor (Glyma16g27950.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020205255.10.0ethylene-responsive transcription factor ABR1 isoform X1
TrEMBLA0A151R2U60.0A0A151R2U6_CAJCA; Ethylene-responsive transcription factor ERF114 family
STRINGGLYMA16G27950.11e-131(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49193253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G43160.15e-27related to AP2 6