PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_40054
Common NameKK1_041679
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family NAC
Protein Properties Length: 308aa    MW: 35780.9 Da    PI: 8.0969
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_40054genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM160.66.3e-50231513128
            NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.. 95 
                    pGfrFhPtdeelv++yL++k+++k++++ e ik++diyk++PwdLp ++++++eke yfF++r +ky+++ r+nr+t sg+Wkatg dk+v+s+  
  C.cajan_40054  23 PGFRFHPTDEELVSFYLRRKLDKKPISI-ELIKQIDIYKYDPWDLPkTSATGGEKEGYFFCRRGRKYRNSIRPNRVTGSGFWKATGIDKPVYSHgg 117
                    9***************************.89***************44666688899************************************965 PP

            NAM  96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     ++  +glkktLv+y+g+a kg+ktdW+mhe+rl
  C.cajan_40054 118 eGNDCIGLKKTLVYYRGSAGKGTKTDWMMHEFRL 151
                    55555***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.44E-5421185IPR003441NAC domain
PROSITE profilePS5100552.79721185IPR003441NAC domain
PfamPF023655.1E-2523151IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    Send to blast
MGVNQDFNKD DHEYVDDDDV PLPGFRFHPT DEELVSFYLR RKLDKKPISI ELIKQIDIYK  60
YDPWDLPKTS ATGGEKEGYF FCRRGRKYRN SIRPNRVTGS GFWKATGIDK PVYSHGGEGN  120
DCIGLKKTLV YYRGSAGKGT KTDWMMHEFR LPSNTDTNTN LPNSKTYVDI PQEAEIWTLC  180
RIFKRNVSQR KHMPELKHSS AKRHSIHDKS SRMNNVEFLT NQEEAYINFG DHYHNEKKPI  240
ISYTNSDQRN NNQFHVSQFY SPVPQQPQLL TAPSSNFWIN PVGNDFFTFD NWDELGSVVK  300
FAVDSPSM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swm_A1e-472319122174NAC domain-containing protein 19
3swm_B1e-472319122174NAC domain-containing protein 19
3swm_C1e-472319122174NAC domain-containing protein 19
3swm_D1e-472319122174NAC domain-containing protein 19
3swp_A1e-472319122174NAC domain-containing protein 19
3swp_B1e-472319122174NAC domain-containing protein 19
3swp_C1e-472319122174NAC domain-containing protein 19
3swp_D1e-472319122174NAC domain-containing protein 19
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the 5'- RRYGCCGT-3' consensus core sequence. Central longevity regulator. Negative regulator of leaf senescence. Modulates cellular H(2)O(2) levels and enhances tolerance to various abiotic stresses through the regulation of DREB2A. {ECO:0000269|PubMed:22345491}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_40054
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Up-regulated by H(2)O(2), paraquat, ozone, 3-aminotriazole and salt stress. {ECO:0000269|PubMed:22345491}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0968980.0BT096898.1 Soybean clone JCVI-FLGm-15F10 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020205022.10.0transcription factor JUNGBRUNNEN 1
SwissprotQ9SK554e-85NAC42_ARATH; Transcription factor JUNGBRUNNEN 1
TrEMBLA0A151R3L40.0A0A151R3L4_CAJCA; NAC domain-containing protein 42
STRINGGLYMA15G40950.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF101334112
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.17e-86NAC domain containing protein 42
Publications ? help Back to Top
  1. Shahnejat-Bushehri S,Nobmann B,Devi Allu A,Balazadeh S
    JUB1 suppresses Pseudomonas syringae-induced defense responses through accumulation of DELLA proteins.
    Plant Signal Behav, 2016. 11(6): p. e1181245
    [PMID:27159137]
  2. Shahnejat-Bushehri S,Tarkowska D,Sakuraba Y,Balazadeh S
    Arabidopsis NAC transcription factor JUB1 regulates GA/BR metabolism and signalling.
    Nat Plants, 2016. 2: p. 16013
    [PMID:27249348]
  3. Shahnejat-Bushehri S, et al.
    Arabidopsis NAC Transcription Factor JUNGBRUNNEN1 Exerts Conserved Control Over Gibberellin and Brassinosteroid Metabolism and Signaling Genes in Tomato.
    Front Plant Sci, 2017. 8: p. 214
    [PMID:28326087]
  4. Sakuraba Y,Bülbül S,Piao W,Choi G,Paek NC
    Arabidopsis EARLY FLOWERING3 increases salt tolerance by suppressing salt stress response pathways.
    Plant J., 2017. 92(6): p. 1106-1120
    [PMID:29032592]
  5. Ebrahimian-Motlagh S, et al.
    JUNGBRUNNEN1 Confers Drought Tolerance Downstream of the HD-Zip I Transcription Factor AtHB13.
    Front Plant Sci, 2017. 8: p. 2118
    [PMID:29326734]