PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_40159
Common NameKK1_044056
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family B3
Protein Properties Length: 144aa    MW: 16651.8 Da    PI: 6.2278
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_40159genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B339.21.2e-1258513100
                    TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-SS CS
             B3  13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrks 100
                    +++  +p++f++e+gg+   s  + l+ ++g +W ++   +k++  ++++kGWkeF+    L  g + +Fk+++  + +l+v++f++s
  C.cajan_40159   5 NSLQKIPNRFTREYGGN--LSNAVFLKPPDGIKWGIYW--TKHDADIWFQKGWKEFATYYSLSHGHV-LFKYQE--TCHLKVHIFDRS 85 
                    55668*********999..8889***************..*************************96.789865..44469***9985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5086311.265185IPR003340B3 DNA binding domain
SMARTSM010190.0062385IPR003340B3 DNA binding domain
PfamPF023621.0E-10684IPR003340B3 DNA binding domain
SuperFamilySSF1019366.08E-15885IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.101.2E-15885IPR015300DNA-binding pseudobarrel domain
CDDcd100174.35E-121083No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    Send to blast
MLIENSLQKI PNRFTREYGG NLSNAVFLKP PDGIKWGIYW TKHDADIWFQ KGWKEFATYY  60
SLSHGHVLFK YQETCHLKVH IFDRSSLEVS YPFCGTQIEH DNLDYVSNDS VEVLDNSVNV  120
LDEVAPSQKT ELKSTIPCPQ PLKN
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_40159
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020206679.14e-92B3 domain-containing protein At3g18960
TrEMBLA0A151QXG31e-104A0A151QXG3_CAJCA; B3 domain-containing protein At3g18960 family
STRINGGLYMA09G20281.14e-65(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9834369
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49475.15e-19B3 family protein