PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_40268
Common NameKK1_042222
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 334aa    MW: 37749 Da    PI: 4.7315
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_40268genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.81.3e-184897255
            AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                   +y GVr+++ +grWvAeI+d      ++ r +lg+++tae+Aa+a+++a++ l+g
  C.cajan_40268 48 RYIGVRQRP-SGRWVAEIKDtI----QNIRLWLGTYDTAEDAARAYDEAARLLRG 97
                   799******.7*********33....35***********************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000189.86E-2947104No hitNo description
PfamPF008475.8E-134897IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.1E-2748104IPR001471AP2/ERF domain
SMARTSM003802.6E-3348111IPR001471AP2/ERF domain
PROSITE profilePS5103219.88848105IPR001471AP2/ERF domain
SuperFamilySSF541711.37E-1948105IPR016177DNA-binding domain
PRINTSPR003679.7E-84960IPR001471AP2/ERF domain
PRINTSPR003679.7E-87187IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    Send to blast
MVNKRKRWEG TEGGEKKREE GNIEWEKLRE EAASMTAAIL GARRAKKRYI GVRQRPSGRW  60
VAEIKDTIQN IRLWLGTYDT AEDAARAYDE AARLLRGPNT RTNFFPSQSS PSVPALPPKI  120
AKLLLIRLKA RNMTSPCMVT TPFPSNHYEQ QTKPEVEPEN FYHQREEPHN ENILDMVGHG  180
IVGESYYGAT SYSSSSITTC DYICGANEAN SIQEGGREDF GFGYDCANNV YDGNNQIVSG  240
KGEFEDCDFG ITDFQFLDTG GSLSYSFSPF EIAEEMVGPL AEEKYDFDDS QLGRETFRMK  300
YERKFSACLY TLIGVSECLR LQDGPENGKE LENF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A1e-1347104159ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_40268
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020205394.10.0ethylene-responsive transcription factor ERN1
TrEMBLA0A151R2530.0A0A151R253_CAJCA; Ethylene-responsive transcription factor RAP2-11
STRINGGLYMA20G03890.21e-155(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33383267
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-14related to AP2 11