PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_40517
Common NameKK1_042589
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family Trihelix
Protein Properties Length: 249aa    MW: 29094.6 Da    PI: 7.054
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_40517genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix90.91.4e-28138222186
       trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                    rW++ ev+ Li++r+++e+++r   +k+  Wee+s++m+  g++rs+k+Ckekwen+nk+yk++  + kkr   +s+tcpyfd+l+
  C.cajan_40517 138 RWPDVEVQSLITVRTSLEHKVRLMGSKGSIWEEISEAMHGMGYNRSAKKCKEKWENINKYYKRTVGSGKKR-RLNSKTCPYFDELD 222
                    8*****************************************************************99998.89999*******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.604.8E-5128194IPR009057Homeodomain-like
PROSITE profilePS500907.352131195IPR017877Myb-like domain
PfamPF138371.1E-21137224No hitNo description
CDDcd122031.05E-21137201No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    Send to blast
DEDDDNSSAS SEALGSRKRR RKTERKLEGF VKNLVTKVME KQELMHRQLV EMIENKERER  60
IKREEAWKHE EMERIRKDEE ARAQERSRNL ALISFIQNLL GHEIQIPQPV EEACGKREED  120
EVEVNAQKDL NNDSSNNRWP DVEVQSLITV RTSLEHKVRL MGSKGSIWEE ISEAMHGMGY  180
NRSAKKCKEK WENINKYYKR TVGSGKKRRL NSKTCPYFDE LDTLYRNGPL SIGNASSNTS  240
DVPQIEEKE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11620RKRRR
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00552DAPTransfer from AT5G47660Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_40517
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150380.0AP015038.1 Vigna angularis var. angularis DNA, chromosome 5, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020205701.10.0trihelix transcription factor GTL1
TrEMBLA0A151R1290.0A0A151R129_CAJCA; Uncharacterized protein (Fragment)
STRINGXP_007147613.11e-144(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF111123338
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47660.11e-47Trihelix family protein