PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_40644
Common NameKK1_044305
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family WRKY
Protein Properties Length: 183aa    MW: 20843.8 Da    PI: 8.3026
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_40644genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY86.52.4e-27103161159
                    ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
           WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                    +dDgy+WrKYG+K+vk++ + r+YY+C+s gC vkk+ver+++d ++v++tYeg Hnhe
  C.cajan_40644 103 MDDGYKWRKYGKKSVKSNCNLRNYYKCSSGGCIVKKRVERDRDDSSYVITTYEGVHNHE 161
                    59********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.4E-3090163IPR003657WRKY domain
SuperFamilySSF1182905.36E-2695163IPR003657WRKY domain
PROSITE profilePS5081128.98898163IPR003657WRKY domain
SMARTSM007741.1E-28103162IPR003657WRKY domain
PfamPF031064.4E-21104161IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    Send to blast
MDFYFGNNPH PYPNYAHNNA NFFDPSSPQI ALSDYLMLDD YVDHHQESRS SQSTTESSEK  60
ATFSSDATHH GATSKNNKKC KNGNKAGVGP RIAFRTKSEL EIMDDGYKWR KYGKKSVKSN  120
CNLRNYYKCS SGGCIVKKRV ERDRDDSSYV ITTYEGVHNH ESPFTTYYSP ISFIHSDAFT  180
STQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-2293163777Probable WRKY transcription factor 4
2lex_A1e-2293163777Probable WRKY transcription factor 4
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_40644
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0949101e-116BT094910.1 Soybean clone JCVI-FLGm-6M4 unknown mRNA.
GenBankBT0957011e-116BT095701.1 Soybean clone JCVI-FLGm-15I9 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020206865.11e-121probable WRKY transcription factor 51
TrEMBLA0A151QWI81e-135A0A151QWI8_CAJCA; Putative WRKY transcription factor 51
STRINGGLYMA05G31800.19e-90(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF112034110
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64810.13e-41WRKY DNA-binding protein 51