PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_40927
Common NameKK1_041316
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 231aa    MW: 26050.9 Da    PI: 10.2331
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_40927genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.27.1e-144995455
                   HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                    h ++Er+RR++i + f  L  l+P +     kK++Ka++L  A+eY+k+Lq
  C.cajan_40927 49 EHIMAERKRRENITKMFIALSALIPGL-----KKMDKASVLSTAIEYVKHLQ 95
                   699************************.....9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.4344594IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.14E-1848111IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-1849107IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000109.7E-124995IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.80E-135099No hitNo description
SMARTSM003531.6E-1451100IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    Send to blast
MPCNLSFEDS TLVPNVPKKT CQYFHGEHSQ EKPQNIKPKK GRSCSQTHEH IMAERKRREN  60
ITKMFIALSA LIPGLKKMDK ASVLSTAIEY VKHLQQRVKV LEQEKKRKIE TIGCFKTNKT  120
NVADDYVSCT YDVLDDKPIK ICPKVEARVS GKDVLIKVMC EKQKGIVGKL LAKVEAHDLS  180
VVCTNVLPFG NSALIITTIA KVHTIASIHV KKYILKLNKI VSPKQKIILT F
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15358ERKRRE
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_40927
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_029125429.11e-146transcription factor bHLH18
TrEMBLA0A151R4X41e-167A0A151R4X4_CAJCA; Transcription factor bHLH25
STRINGGLYMA07G13406.12e-91(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1634849
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.12e-40bHLH family protein