PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_40972
Common NameKK1_038267
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 270aa    MW: 29187.4 Da    PI: 8.0244
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_40972genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.44.6e-1276122354
                    HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
            HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                    ++h+e+ErrRR+riN  +++Lr l+P+      +K++Ka+ L +++  +k+L
  C.cajan_40972  76 KNHSEAERRRRERINGHLATLRGLVPST-----EKMDKATLLAQVISQVKEL 122
                    58*************************8.....8***********9988887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.23773122IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.6E-1076122IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474598.24E-1377125IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.6E-1377124IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.2E-1179128IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048730.00265161227No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    Send to blast
MVYSYDKTSS SGSDVSGLFN PTLHNLGASN GVLRGGLSSP HSLVYESDKG ELVKCPSTAK  60
VGKNEICEAK ALAALKNHSE AERRRRERIN GHLATLRGLV PSTEKMDKAT LLAQVISQVK  120
ELKKNAVEAS KGLLIPMDAD EVKVEPYDDE GGNGSMFYSA TICCDFQPEI LSDLRKTLDS  180
LPIHLVKAEI STLAGRMKNV FVFTCCKGTN IHIEACHALA STVHQALCSV LEKAAASLEF  240
SPRTSHASKR RRLCFIETST SSCNHGSCLC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18186ERRRRE
2248252KRRRL
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_40972
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311110.0KT031111.1 Glycine max clone HN_CCL_47 bHLH transcription factor (Glyma07g32690.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020202302.10.0transcription factor bHLH30
TrEMBLA0A151RD580.0A0A151RD58_CAJCA; Transcription factor bHLH51
STRINGGLYMA07G32690.11e-169(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF89863143
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40200.18e-38bHLH family protein