PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_41039
Common NameKK1_038791
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family B3
Protein Properties Length: 175aa    MW: 20617.4 Da    PI: 8.9198
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_41039genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B348.22e-151781799
                   E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
             B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                   ++p+k++e++g++  ++  + l++++g +W+++l  +k+ g+++++kGWk+F++ + L  g  ++F+ +++s f  +v++f+ 
  C.cajan_41039  1 MIPNKYVEKYGEDL-STSFVFLKTPNGAEWKLNL--EKCYGKIWFQKGWKKFAEYHSLAHGHLLIFRCERTSHF--KVHIFDP 78
                   69********7664.334799999**********..*******************************8887888..9999986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd100178.90E-16177No hitNo description
PfamPF023621.2E-12177IPR003340B3 DNA binding domain
PROSITE profilePS5086313.916179IPR003340B3 DNA binding domain
SMARTSM010190.001179IPR003340B3 DNA binding domain
SuperFamilySSF1019366.67E-18179IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.102.2E-19279IPR015300DNA-binding pseudobarrel domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    Send to blast
MIPNKYVEKY GEDLSTSFVF LKTPNGAEWK LNLEKCYGKI WFQKGWKKFA EYHSLAHGHL  60
LIFRCERTSH FKVHIFDPSA LEIKYPSQTI ERETVSNSRG NESTNVENLE YHRPGPKRKD  120
NSSLEFLQQY QLTSYNCVKV ENNEILPEEA LHRTDTKCKG IRFCVFKHFI KSFTS
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_41039
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_029125075.11e-115B3 domain-containing protein Os11g0197600
RefseqXP_029125076.11e-115B3 domain-containing protein Os11g0197600
TrEMBLA0A151RBX01e-128A0A151RBX0_CAJCA; B3 domain-containing transcription factor VRN1
STRINGGLYMA18G30790.13e-68(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9834369
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-19B3 family protein