PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_41095
Common NameKK1_044047
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family C2H2
Protein Properties Length: 167aa    MW: 18336.1 Da    PI: 10.2509
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_41095genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.60.000873557123
                   EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                   ++C+ C++ Fs+   L  H  +H
  C.cajan_41095 35 FECKTCNRKFSSFQALGGHRASH 57
                   89**********99999998887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.160.603.6E-43153IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SuperFamilySSF576671.83E-934105No hitNo description
PfamPF139121.3E-113459IPR007087Zinc finger, C2H2
SMARTSM003550.193557IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.913562IPR007087Zinc finger, C2H2
PROSITE patternPS0002803757IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.30.160.600.00179105IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SMARTSM003550.5583105IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.80683110IPR007087Zinc finger, C2H2
PfamPF139122.0E-983107IPR007087Zinc finger, C2H2
PROSITE patternPS00028085105IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    Send to blast
MKREREKEGT TLESWDVTNC AMTPHASVST NPQVFECKTC NRKFSSFQAL GGHRASHKRV  60
RLGGEEQLGA GAKSMGLSGP KMHECSICGQ GFLMGQALGG HMRRHRDRGA TNKAFSSINE  120
VVAKVSVFKR SCNAKVFCLD LNLTPLENDF KLLLFGKVSP KVNLSSF
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_41095
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020206675.11e-122zinc finger protein ZAT11
TrEMBLA0A151QXG01e-120A0A151QXG0_CAJCA; Zinc finger protein 1
STRINGGLYMA13G19560.16e-78(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF31634175
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37430.19e-41C2H2 family protein