PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_41140
Common NameKK1_041785, KK1_041788
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 225aa    MW: 25576.9 Da    PI: 8.7172
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_41140genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.65.3e-1461113155
                    CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    +++ h e+Er+RR+++ +  + Lr+llP ++   ++K sK++   +Av+YI++Lq
  C.cajan_41140  61 KKMVHREIERQRRQEMATLHASLRSLLPLDF--IKGKRSKSDQMNQAVNYINHLQ 113
                    6889*************************75..*********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474595.1E-1458136IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.52960112IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.0E-1161113IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.3E-1161132IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.30E-1061117No hitNo description
SMARTSM003536.6E-566118IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    Send to blast
MFPLQRGNEL VIQFSNGLHQ QHKISQDLIL DDHVSDKKLP TSRPNKLFYE PGHANSNEYT  60
KKMVHREIER QRRQEMATLH ASLRSLLPLD FIKGKRSKSD QMNQAVNYIN HLQKNIKELS  120
DKRDGLKRKL SINQSLESHH ETKHASGGFT VHQNSGGGAV GIEISGFGEE GFSLSKLLQL  180
LLEERLEVVS CLSTQVNGRL LHSVQCEVDN SDSVDLSELR RKFSE
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_41140
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0966001e-155BT096600.1 Soybean clone JCVI-FLGm-20L20 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020205117.11e-164transcription factor bHLH118
RefseqXP_020205128.11e-164transcription factor bHLH118
TrEMBLA0A151R3D31e-163A0A151R3D3_CAJCA; Transcription factor bHLH120 family
STRINGGLYMA10G38630.11e-120(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF79233125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51780.12e-29bHLH family protein