PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

C.cajan_41229

Common Name

KK1_043286

Organism

Cajanus cajan

Taxonomic ID

3821

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus

Family

MYB_related

Protein Properties

Length: 210aa MW: 24494.3 Da PI: 6.7572

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
C.cajan_41229	genome	IIPG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	40.7	5.3e-13	21	64	4	47
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 WT++E+ l++ + k++G+g Wk Ia+++ +++t q+ s+ qk+ C.cajan_41229 21 WTEDEHRLFLLGLKRFGKGKWKDIAKKVLLTKTKTQIASHAQKF 64 ******************************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	14.843	13	69	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	3.0E-9	13	64	IPR009057	Homeodomain-like
SuperFamily	SSF46689	2.77E-14	15	69	IPR009057	Homeodomain-like
SMART	SM00717	4.8E-7	17	67	IPR001005	SANT/Myb domain
TIGRFAMs	TIGR01557	2.1E-15	19	68	IPR006447	Myb domain, plants
Pfam	PF00249	2.3E-10	20	63	IPR001005	SANT/Myb domain
CDD	cd00167	1.59E-8	21	65	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 210 aa Download sequence Send to blast
MTPHLKQEST AASQRTKCVH WTEDEHRLFL LGLKRFGKGK WKDIAKKVLL TKTKTQIASH 60 AQKFFLHKSS AKKRKSIHDL TLDDDANFKY DQQNREITGS PGNNLVQYSI DEHSPNEQLQ 120 EEPSPPFEAY SVLQHFEQQQ QSEAPSAVQQ LPHHLDNHDL APLPDQIELP QLFNHENFIP 180 HFAQLYSSDI FHQDLPNNFD FNFFDPKTWK

Cis-element ? help Back to Top
Source	Link
PlantRegMap	C.cajan_41229

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A151QZC5	1e-153	A0A151QZC5_CAJCA; Myb-like protein J

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF16777	4	8

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04760.1	3e-15	MYB family protein