PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

C.cajan_41231

Common Name

KK1_043288

Organism

Cajanus cajan

Taxonomic ID

3821

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus

Family

MYB_related

Protein Properties

Length: 127aa MW: 14771.9 Da PI: 8.4829

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
C.cajan_41231	genome	IIPG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27	1.1e-08	20	58	9	47
HHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 9 dellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 d l++ + k++G++ Wk Ia+++ +++t q+ s+ qk+ C.cajan_41231 20 DRLFILGLKRFGKRKWKDIAQKVLLTKTKTQIASHAQKF 58 679999*******************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
TIGRFAMs	TIGR01557	1.5E-9	20	62	IPR006447	Myb domain, plants
Pfam	PF00249	6.5E-6	20	57	IPR001005	SANT/Myb domain
CDD	cd00167	7.47E-5	20	59	No hit	No description
SuperFamily	SSF46689	2.17E-7	20	63	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	8.9E-5	20	54	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 127 aa Download sequence Send to blast
MIEVGIKSFK YLHSFLLFCD RLFILGLKRF GKRKWKDIAQ KVLLTKTKTQ IASHAQKFFL 60 RKTSAKIRGN IHDLTLDDDA GFEYDQQNRE ITGSLSNNLV QHLIDEHSQN EQLEEEPSPT 120 FEAYSVL

Cis-element ? help Back to Top
Source	Link
PlantRegMap	C.cajan_41231

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A151QZF8	7e-89	A0A151QZF8_CAJCA; Myb-like protein J

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF16777	4	8

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04760.1	1e-17	MYB family protein