PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_41232
Common NameKK1_043289
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family MYB_related
Protein Properties Length: 88aa    MW: 10439.3 Da    PI: 10.7012
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_41232genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.57.4e-092058947
                     HHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  9 dellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     d l++ + k++G++ Wk Ia+++ +++t  q+ s+ qk+
    C.cajan_41232 20 DRLFLLGLKRFGKRKWKDIAQKVLLTKTKTQIASHAQKF 58
                     6789999******************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd001671.22E-42059No hitNo description
Gene3DG3DSA:1.10.10.605.1E-52054IPR009057Homeodomain-like
SuperFamilySSF466892.99E-82064IPR009057Homeodomain-like
PfamPF002494.4E-62057IPR001005SANT/Myb domain
TIGRFAMsTIGR015574.1E-102062IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 88 aa     Download sequence    Send to blast
MIEVGIKSFK YLQSFLLFCD RLFLLGLKRF GKRKWKDIAQ KVLLTKTKTQ IASHAQKFFL  60
RKSSVKIRRN IHDLTLDDDA GFEYDQQN
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_41232
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018813691.11e-17PREDICTED: transcription factor DIVARICATA
RefseqXP_023543041.12e-17transcription factor DIVARICATA-like
TrEMBLA0A151QZD62e-56A0A151QZD6_CAJCA; Myb-like protein J
STRINGXP_006485458.15e-16(Citrus sinensis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1677748
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04760.11e-14MYB family protein