PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

C.cajan_41233

Common Name

KK1_043290

Organism

Cajanus cajan

Taxonomic ID

3821

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus

Family

MYB_related

Protein Properties

Length: 101aa MW: 11681.6 Da PI: 10.5272

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
C.cajan_41233	genome	IIPG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.1	9.9e-09	20	58	9	47
HHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 9 dellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 d l++ + k++G+g Wk Ia+++ +++t q+ s+ qk+ C.cajan_41233 20 DRLFLLGLKRFGKGKWKDIAQKVLLTKTKTQIASHAQKF 58 6789999******************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	3.1E-5	20	54	IPR009057	Homeodomain-like
SuperFamily	SSF46689	1.71E-8	20	64	IPR009057	Homeodomain-like
Pfam	PF00249	5.1E-6	20	57	IPR001005	SANT/Myb domain
TIGRFAMs	TIGR01557	3.3E-10	20	62	IPR006447	Myb domain, plants
CDD	cd00167	3.05E-5	20	59	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 101 aa Download sequence Send to blast
MIEVGIKSFK YLQSFLLFCD RLFLLGLKRF GKGKWKDIAQ KVLLTKTKTQ IASHAQKFFL 60 HKSSMKKRTS IHDLTLNDDA GFEYDQQNRE ITGSPSNNLV Q

Cis-element ? help Back to Top
Source	Link
PlantRegMap	C.cajan_41233

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_023543041.1	2e-20	transcription factor DIVARICATA-like
TrEMBL	A0A151QZ84	5e-68	A0A151QZ84_CAJCA; Myb-like protein J
STRING	XP_008456608.1	2e-19	(Cucumis melo)
STRING	XP_004140910.1	2e-19	(Cucumis sativus)
STRING	XP_004169172.1	2e-19	(Cucumis sativus)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF16777	4	8

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04760.1	6e-12	MYB family protein