PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_41603
Common NameKK1_043563
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 257aa    MW: 28254.5 Da    PI: 4.9536
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_41603genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2582.3e-1870121156
            AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                    + y+GVr +  +g+Wv+eIr+p++   + r++lg++ tae+Aa+a++ a+++++g+
  C.cajan_41603  70 PSYRGVRMRA-WGKWVSEIREPRK---KSRIWLGTYPTAEMAARAHDVAALAIKGH 121
                    57*****998.**********843...6***********************99986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000186.26E-3370130No hitNo description
PfamPF008472.8E-1370121IPR001471AP2/ERF domain
SMARTSM003802.7E-3771134IPR001471AP2/ERF domain
PROSITE profilePS5103223.24871128IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.1E-3171129IPR001471AP2/ERF domain
SuperFamilySSF541711.9E-2171129IPR016177DNA-binding domain
PRINTSPR003672.7E-107283IPR001471AP2/ERF domain
PRINTSPR003672.7E-1094110IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    Send to blast
MESNASENFV ATFSSTTTSS TSSSPTSSTS TSNSCTKQDP PDDSTSAQNQ NTPNSKKRQR  60
NDHNENKDHP SYRGVRMRAW GKWVSEIREP RKKSRIWLGT YPTAEMAARA HDVAALAIKG  120
HSAYLNFPNL AHDLPRPITT SPKDIQAAAA KAATTFFDHV DKDEQNQQAS SSNICMDSTE  180
GGHVQAEQAS SSTLSSMDTT QDSSSSLSTA DDDTLFDLPD LFPDGNTALF SYSSSNWHLC  240
ALDSGFRIEE QFFWENY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-17681291173Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00312DAPTransfer from AT2G44940Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_41603
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150371e-145AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020206318.10.0ethylene-responsive transcription factor ERF034
SwissprotQ8LBQ71e-66ERF34_ARATH; Ethylene-responsive transcription factor ERF034
TrEMBLA0A151QYQ10.0A0A151QYQ1_CAJCA; Ethylene-responsive transcription factor ERF034 family
STRINGXP_007140776.11e-113(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF19234263
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.14e-49ERF family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]