PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_41951
Common NameKK1_039221
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 210aa    MW: 23521.9 Da    PI: 4.2991
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_41951genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.53.8e-191867255
            AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    y+GVr +k +g++v+eIr p++   rkr++lg+++tae+Aa+a +aa+ +l+g
  C.cajan_41951 18 SYRGVRKRK-WGKYVSEIRLPNS---RKRIWLGSYDTAEKAARAFDAAMFCLRG 67
                   6*****999.**********933...5*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008478.3E-121867IPR001471AP2/ERF domain
SMARTSM003809.8E-331881IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.7E-291876IPR001471AP2/ERF domain
PROSITE profilePS5103221.4171875IPR001471AP2/ERF domain
SuperFamilySSF541711.9E-201876IPR016177DNA-binding domain
CDDcd000182.07E-301975No hitNo description
PRINTSPR003674.7E-101930IPR001471AP2/ERF domain
PRINTSPR003674.7E-104157IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    Send to blast
MVKPTAEKQT AEQNDTTSYR GVRKRKWGKY VSEIRLPNSR KRIWLGSYDT AEKAARAFDA  60
AMFCLRGSGA RFNFPSDPPD IAGGRTMTPS QIQIAAARFA NSEPRKECSG RPVESLTSDE  120
DSQETTSLPL DTSSPPLSDV TVQNDTELLH GYLPDPFSDL GSDNFQPDFS FFPGFDDFSS  180
DFLFPEIPSF DYGEENLEGL IIQDSFLWNF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-1615771174Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00151DAPTransfer from AT1G19210Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_41951
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020203062.11e-154ethylene-responsive transcription factor ERF017
SwissprotQ84QC26e-52ERF17_ARATH; Ethylene-responsive transcription factor ERF017
TrEMBLA0A151RAA21e-152A0A151RAA2_CAJCA; Ethylene-responsive transcription factor ERF017 family
STRINGXP_007138631.11e-112(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14793399
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G21960.18e-45ERF family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Li SJ, et al.
    The Citrus transcription factor, CitERF13, regulates citric acid accumulation via a protein-protein interaction with the vacuolar proton pump, CitVHA-c4.
    Sci Rep, 2016. 6: p. 20151
    [PMID:26837571]
  3. Yin XR, et al.
    Involvement of an ethylene response factor in chlorophyll degradation during citrus fruit degreening.
    Plant J., 2016. 86(5): p. 403-12
    [PMID:27037684]