PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_42047
Common NameKK1_047215
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 234aa    MW: 26584.2 Da    PI: 8.8799
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_42047genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.81.7e-1552100255
            AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     y+GVr++k  g+Wv+e+r+p++   + r++lg++ t+e+Aa+a++  ++ ++g
  C.cajan_42047  52 IYRGVRQRK--GKWVCELREPKK---TSRIWLGTYPTPEMAARAHDVGALVIRG 100
                    69***9987..*********853...5*******************98877776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008475.8E-115193IPR001471AP2/ERF domain
CDDcd000182.04E-2851110No hitNo description
SuperFamilySSF541717.19E-1852110IPR016177DNA-binding domain
SMARTSM003804.5E-2852114IPR001471AP2/ERF domain
PROSITE profilePS5103220.0252108IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.5E-2752109IPR001471AP2/ERF domain
PRINTSPR003676.8E-55364IPR001471AP2/ERF domain
PRINTSPR003676.8E-57490IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    Send to blast
MNFEIESPFS FQSSSLICTP PKNPNLVSET SQFVSHKRKG GRKKFKETRH PIYRGVRQRK  60
GKWVCELREP KKTSRIWLGT YPTPEMAARA HDVGALVIRG TSAILNFPNS LSFLPIVNSS  120
SSHKDIRAAA AEAAESFRPI TSFNQKIGRK TKLLESSLKS MHSLDREKCD AINSGTEKSI  180
EDLSSTHVFF DEEAFFNMPS LLDRMAESLG VFPLPYQDYL DDYAYCMDFN LWTD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-1339113377Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_42047
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020208510.11e-140dehydration-responsive element-binding protein 1F
TrEMBLA0A151QPC11e-175A0A151QPC1_CAJCA; Dehydration-responsive element-binding protein 1F
STRINGXP_007150099.13e-97(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1826166
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.16e-43C-repeat-binding factor 4