PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_42051
Common NameKK1_047219
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 194aa    MW: 21687.5 Da    PI: 7.3877
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_42051genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.79.3e-161969155
            AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                   + y+G+r++   ++Wv+e+r+p   +k+ r++lg++ t+e Aa+a++ a ++l+g
  C.cajan_42051 19 PVYRGIRQRN-GNKWVCEVREP---NKKSRIWLGTYPTPELAARAHDVAVLALKG 69
                   68*****999.9******9998...347**********************99987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.9E-111969IPR001471AP2/ERF domain
SuperFamilySSF541716.02E-192079IPR016177DNA-binding domain
PROSITE profilePS5103221.142077IPR001471AP2/ERF domain
SMARTSM003802.1E-242083IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.0E-282079IPR001471AP2/ERF domain
CDDcd000181.85E-252179No hitNo description
PRINTSPR003671.7E-72132IPR001471AP2/ERF domain
PRINTSPR003671.7E-74359IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0009631Biological Processcold acclimation
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    Send to blast
MSSHKRKAGR KKFRETRHPV YRGIRQRNGN KWVCEVREPN KKSRIWLGTY PTPELAARAH  60
DVAVLALKGT SAIFNFPDSV SLLPVAKSSS AEDIRLAASK VSKVFAPSSL CSSSSSRVES  120
LETTKPCLVD EIVKSRNDND ESNESAFFDE EAVYNMPSLL DSMAEGLLIT PPSMMRGFDW  180
DQVDCETDLT LWTD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-1318821277Ethylene-responsive transcription factor ERF096
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00454DAPTransfer from AT4G25490Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_42051
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020208511.11e-143dehydration-responsive element-binding protein 1B
TrEMBLA0A151QPD31e-141A0A151QPD3_CAJCA; Dehydration-responsive element-binding protein 1C
STRINGGLYMA12G30740.21e-105(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24333224
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25470.13e-57C-repeat/DRE binding factor 2