PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

C.cajan_42375

Common Name

KK1_043591

Organism

Cajanus cajan

Taxonomic ID

3821

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus

Family

bZIP

Protein Properties

Length: 297aa MW: 32864.7 Da PI: 6.368

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
C.cajan_42375	genome	IIPG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	35.2	2.7e-11	153	198	5	50
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 kr +r NR +A+rsR RK+++i eLe+ v +L++e +aL ++ C.cajan_42375 153 KRVKRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVA 198 8999*********************************999987765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	2.2E-14	149	213	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.703	151	203	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	4.4E-14	153	204	No hit	No description
Pfam	PF00170	1.2E-9	153	198	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.05E-11	153	207	No hit	No description
CDD	cd14703	1.10E-20	154	204	No hit	No description
PROSITE pattern	PS00036	0	156	171	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 297 aa Download sequence Send to blast
MANFSPTTST TTTTTTATTP PPPSWVDEFL DFSSARRGAH RRSASDSIAF LETPFLEECR 60 AGFDRLDEDQ LISMFSDDIA TAALPPPPLS SASNPSSPSS DQNSNNDEKP MAMALDVKPK 120 TETVEDESSC KNEAAPPPPS ASATCTETVV DPKRVKRILA NRQSAQRSRV RKLQYISELE 180 RSVTTLQTEV SALSPRVAFL DHQRLILNVD NSALKQRIAA LAQDKIFKDA HQEALKKEIE 240 RLRQIYHQQN LQKMSNSVNN NVQSTQTSQA QAMQLHQQQL TVSQPLGCKD NKEQLLS

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator. {ECO:0000269\|PubMed:17719007}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	C.cajan_42375

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AP015040	1e-103	AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020206338.1	0.0	basic leucine zipper 34
Swissprot	Q9M2K4	3e-92	BZP61_ARATH; Basic leucine zipper 61
TrEMBL	A0A151QYN7	0.0	A0A151QYN7_CAJCA; Transcription factor RF2b
STRING	XP_007149416.1	1e-154	(Phaseolus vulgaris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF2011	34	88

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42380.2	5e-71	bZIP family protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Gibalová A, et al. Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte. Plant Reprod, 2017. 30(1): p. 1-17 [PMID:27896439] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]