PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_42397
Common NameKK1_040323
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 104aa    MW: 12427.4 Da    PI: 10.6923
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_42397genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2378.5e-122162351
            AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51
                    +GV++  k+ +W A I++      +k+++lg+ g+ eeAa ++++a+ 
  C.cajan_42397 21 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQEEAAHLYDRAAF 62
                   79**98..47*********4.....5********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003805.2E-42079IPR001471AP2/ERF domain
PfamPF008473.9E-62064IPR001471AP2/ERF domain
SuperFamilySSF541712.03E-82165IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.106.4E-72369IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 104 aa     Download sequence    Send to blast
PIKRRKRHRR KNLHNQEPCL MRGVYFKNMK WQAAIKVDKK QIHLGTVGSQ EEAAHLYDRA  60
AFMCGREPNF ELPEDEKREL SKFKWDEFLA MTRQAITRKS NLSL
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_42397
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0909351e-112BT090935.1 Soybean clone JCVI-FLGm-5P23 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020203924.16e-70ethylene-responsive transcription factor-like protein At4g13040 isoform X1
RefseqXP_020203925.16e-70ethylene-responsive transcription factor-like protein At4g13040 isoform X2
SwissprotQ56XP92e-44ERFL1_ARATH; Ethylene-responsive transcription factor-like protein At4g13040
TrEMBLA0A151R7C62e-72A0A151R7C6_CAJCA; Ethylene-responsive transcription factor-like protein At4g13040 family (Fragment)
STRINGGLYMA18G33460.13e-59(Glycine max)
STRINGXP_007140664.12e-59(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54573253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.28e-47ERF family protein