PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_42628
Common NameKK1_042726
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 268aa    MW: 30414 Da    PI: 8.4831
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_42628genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.43.4e-1087132555
                    HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    h ++Er+RR+++   f  L  ++P +     kK++K +iL  +++ +k+Lq
  C.cajan_42628  87 HVIAERKRRENLTRLFIALSAIIPGL-----KKMDKLSILNNTIDRVKYLQ 132
                    899***********************.....9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.69482131IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.54E-1586150IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.0E-1486148IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.80E-987136No hitNo description
PfamPF000105.9E-887132IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003539.4E-1088137IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    Send to blast
MDDGCDIFNE HDIVSAEEEL KHNIGNASCL EENTGNTSSE KPMFAFHNLS FEDTIEVPNI  60
TSKSKRIEPE NGKCNKRVRN SSETNDHVIA ERKRRENLTR LFIALSAIIP GLKKMDKLSI  120
LNNTIDRVKY LQNRIKVLEE ENQKRRMESM TTLANKKPNV NVSDNFFGIS NGLDRPSKTF  180
PTVQVSISTK DVIIKVICDK RNGIVRKLLA TLAIHNLSVV CSNVLPFGSY ALNISIIAKV  240
DRQFIMTMDD YLLKNLKEDL LKCCILQQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
19095ERKRRE
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_42628
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_029125605.10.0transcription factor bHLH18
TrEMBLA0A151R0T50.0A0A151R0T5_CAJCA; Transcription factor bHLH25
STRINGXP_007134384.11e-68(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1634849
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.11e-40bHLH family protein