PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_43297
Common NameKK1_044006
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family G2-like
Protein Properties Length: 237aa    MW: 26702.6 Da    PI: 9.8502
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_43297genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like89.62.8e-281370155
        G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPkti...lelmkvkgLtlehvkSHLQkYRl 55
                   k+rlrWt++LH+rFveav++LGG++ AtPk i   +++m+v  L ++h+kSHLQkYR+
  C.cajan_43297 13 KERLRWTQQLHDRFVEAVNKLGGPDSATPKGIlkgMKAMGVSELNIYHIKSHLQKYRI 70
                   68******************************3333567889999************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129410.6271073IPR017930Myb domain
Gene3DG3DSA:1.10.10.608.5E-271171IPR009057Homeodomain-like
SuperFamilySSF466892.51E-141270IPR009057Homeodomain-like
TIGRFAMsTIGR015571.6E-221371IPR006447Myb domain, plants
PfamPF002493.8E-71569IPR001005SANT/Myb domain
PfamPF143793.6E-13102141IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    Send to blast
MGSTRSRASA TAKERLRWTQ QLHDRFVEAV NKLGGPDSAT PKGILKGMKA MGVSELNIYH  60
IKSHLQKYRI SKLIPESPTR GKLEKRSISD ILPNFSSISA LQLKEVLQMQ TEMQNRLSDK  120
TEVQRSLKLK IEAQGKYMER IGQSNHSKTI IEKACKPFAT TIASLPCLCE ESESLRTQLE  180
EEHQSSKKQK ISEEGVFLTS FEHASSTPLE FNNQTWNLSW SQLAAACQSP LVPNFLL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A5e-181272158Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B5e-181272158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A5e-181272158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C5e-181272158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D5e-181272158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F5e-181272158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H5e-181272158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J5e-181272158Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_43297
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0922230.0BT092223.1 Soybean clone JCVI-FLGm-10K14 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020206627.11e-175myb family transcription factor PHL7
SwissprotQ9SJW03e-44PHL7_ARATH; Myb family transcription factor PHL7
TrEMBLA0A151QXJ01e-174A0A151QXJ0_CAJCA; Myb family transcription factor APL
STRINGGLYMA18G43130.21e-145(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF106592535
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.11e-46G2-like family protein