PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

C.cajan_43330

Common Name

KK1_045618

Organism

Cajanus cajan

Taxonomic ID

3821

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus

Family

WOX

Protein Properties

Length: 320aa MW: 35635.8 Da PI: 7.2693

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
C.cajan_43330	genome	IIPG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	26.6	1e-08	3	40	24	57
S--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 24 ypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +p ++e++++ +l ++ +++V++WFqNr+ + k+ C.cajan_43330 3 NPPRDEIRRIRVQLqeygQVGDANVFYWFQNRKSRSKH 40 7999*******************************995 PP
2	Wus_type_Homeobox	67	3.4e-22	1	41	24	64
Wus_type_Homeobox 24 lrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +++P+++ei+ri+ +L+eyG+++d+NVfyWFQNrk+R+++k C.cajan_43330 1 MVNPPRDEIRRIRVQLQEYGQVGDANVFYWFQNRKSRSKHK 41 78*************************************99 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF00046	3.0E-6	3	40	IPR001356	Homeobox domain
SuperFamily	SSF46689	1.2E-5	3	44	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005634	Cellular Component	nucleus
GO:0016021	Cellular Component	integral component of membrane
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 320 aa Download sequence Send to blast
MVNPPRDEIR RIRVQLQEYG QVGDANVFYW FQNRKSRSKH KLRHLQNSKN KNAEAHQNAV 60 SLPQMTPPSS SSSSSEKSSP KKFMHPKGFS FGFSNVNDAV PNSPTTSVNQ TYFQPYHHNE 120 TNLLPPAPES FSFLAHNNGQ CVATDAMSTL GFSFPDFSNN MMQSQHVGPC TSLLLNEITN 180 HETSSKKDLD EEKALKIMHQ HPQHNFSLTT TPLTTVVHPS TSTPISAPCP INQFQGVGDG 240 AADRAQCTVF FNDVAFEVAV GPFNVRQAFG DEAMLFYSSG HPVPTNEWGV TLHPLQHGAY 300 YYLGLVCIFF SYSINFFLSG

Cis-element ? help Back to Top
Source	Link
PlantRegMap	C.cajan_43330

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_029126019.1	0.0	WUSCHEL-related homeobox 9
Refseq	XP_029126020.1	0.0	WUSCHEL-related homeobox 9
TrEMBL	A0A151QTC7	0.0	A0A151QTC7_CAJCA; WUSCHEL-related homeobox 9
STRING	XP_007153888.1	1e-132	(Phaseolus vulgaris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF3824	33	61

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45980.1	7e-36	WUSCHEL related homeobox 8