PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_43791
Common NameKK1_039817
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family Trihelix
Protein Properties Length: 616aa    MW: 68587.4 Da    PI: 5.5371
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_43791genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix93.12.8e-2966149186
       trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                    rW++qe+laL+++r++m+ ++r+++ k+plWeevs+k++e g++r++k+Ckek+en+ k++k++keg++++++++  t+++fdql+
  C.cajan_43791  66 RWPRQETLALLKIRSDMDVAFRDASVKGPLWEEVSRKLAELGYHRNAKKCKEKFENVYKYHKRTKEGRSGKSEGK--TYRFFDQLQ 149
                    8********************************************************************975544..6******98 PP
2trihelix1041.1e-32433518187
       trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                    rW+k ev aLi++r+ ++++++++  k+plWee+s+ mr+ g++r++k+Ckekwen+nk++kk+ke++kkr +e+s+tcpyf+ql+a
  C.cajan_43791 433 RWPKVEVEALINLRTTLDTKYQESGPKGPLWEEISALMRKMGYNRKAKRCKEKWENINKYFKKVKESNKKR-PEDSKTCPYFHQLDA 518
                    8*********************************************************************8.99***********85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007170.002863125IPR001005SANT/Myb domain
CDDcd122032.29E-2465130No hitNo description
PROSITE profilePS500906.73765123IPR017877Myb-like domain
PfamPF138374.3E-1965151No hitNo description
SMARTSM007173.6E-4430492IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.607.6E-4431489IPR009057Homeodomain-like
PROSITE profilePS500906.969432490IPR017877Myb-like domain
CDDcd122031.05E-27432497No hitNo description
PfamPF138374.2E-22432519No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010192Biological Processmucilage biosynthetic process
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 616 aa     Download sequence    Send to blast
MLGDSAVLGT GGGGSGDAAT AISAVAASGR ASDSGGGDNN NGDRSNSGDD ERGRVEEGDR  60
SFGGNRWPRQ ETLALLKIRS DMDVAFRDAS VKGPLWEEVS RKLAELGYHR NAKKCKEKFE  120
NVYKYHKRTK EGRSGKSEGK TYRFFDQLQA LENNPAIQSP TPSSKPPSQT TTPLPATPVS  180
IVVTTTPSSI MPPLPLPPVS NNTTVPSTTT LPMPQAILNI APSPALNITT PSYPSSNPTY  240
FPPQTPNPTS NNNNNNAPNT ITPPSFPTIP MELLSNSSSS STSSEGTMEG GGARRKRKRK  300
WKDFFERLMK EVIEKQEELQ RRFLEAIEKR EQERVVREDA WRMQEMQRIN REREILAQER  360
SIAAAKDAAV MTFLQKIAEH QQLPEAPPVQ PLALQPQPQH QVQQQQQLVV ANVESNKADN  420
NGENLMIGAS SSRWPKVEVE ALINLRTTLD TKYQESGPKG PLWEEISALM RKMGYNRKAK  480
RCKEKWENIN KYFKKVKESN KKRPEDSKTC PYFHQLDALY REKNKVEGQM KPESTMTPLM  540
VLPEQQWPPQ QHVVPPEVTM GDAQNDPMDR QHHEDEEEDD DKEIGDEDED EDEEGGGNYE  600
IVASKPASAG GDNSAE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1293298RRKRKR
2293299RRKRKRK
3294299RKRKRK
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that binds specific DNA sequence. {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00243DAPTransfer from AT1G76880Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_43791
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAF3724981e-173AF372498.1 Glycine max GT-2 factor mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020203525.10.0trihelix transcription factor GT-2
SwissprotQ391171e-145TGT2_ARATH; Trihelix transcription factor GT-2
TrEMBLA0A151R8Q10.0A0A151R8Q1_CAJCA; Uncharacterized protein
STRINGGLYMA02G09060.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF37334181
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76880.12e-93Trihelix family protein