PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_44120
Common NameKK1_046106
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ARR-B
Protein Properties Length: 223aa    MW: 25522.6 Da    PI: 8.3066
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_44120genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like76.14.6e-24158207151
        G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 
                    kpr+ Wtp LH++F++av+q+ G +kA+Pk+ile+m++ gLt++hv+SHLQ
  C.cajan_44120 158 KPRVIWTPMLHREFLKAVKQI-GDDKAVPKKILEVMNIAGLTRDHVASHLQ 207
                    79*******************.9**************************** PP
2Response_reg62.71.8e-21131211109
                    EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTE CS
   Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGa 94 
                    vl +d +p+v+e  rq++++ +y +v ++++++ al+l++e +  +D+il+ ++mp++dG+e+l++ ++   ++p+iv++a +++  + +a++ Ga
  C.cajan_44120  13 VLAIDHDPSVLEFTRQICSQLKY-HVVTCTESPFALNLVREIKacIDVILMELDMPNLDGHEFLQHAKKDI-QIPVIVMSADNAKGSVMKAVRNGA 106
                    7899*******************.9***************9999**********************98866.************************ PP

                    SEEEESS--HHHHHH CS
   Response_reg  95 kdflsKpfdpeelvk 109
                     d+  Kp + ++ ++
  C.cajan_44120 107 CDYWNKPLHVNQFRN 121
                    *******99998776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.23004.0E-2810145No hitNo description
SuperFamilySSF521722.99E-2710162IPR011006CheY-like superfamily
SMARTSM004483.7E-1711123IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011032.33912127IPR001789Signal transduction response regulator, receiver domain
PfamPF000721.5E-1713121IPR001789Signal transduction response regulator, receiver domain
CDDcd001564.38E-1914127No hitNo description
Gene3DG3DSA:1.10.10.605.2E-23156207IPR009057Homeodomain-like
SuperFamilySSF466898.06E-15156210IPR009057Homeodomain-like
TIGRFAMsTIGR015571.6E-22158211IPR006447Myb domain, plants
PfamPF002497.9E-6163207IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    Send to blast
MSEVSQFPAG LRVLAIDHDP SVLEFTRQIC SQLKYHVVTC TESPFALNLV REIKACIDVI  60
LMELDMPNLD GHEFLQHAKK DIQIPVIVMS ADNAKGSVMK AVRNGACDYW NKPLHVNQFR  120
NMWIHAARKA FKIFRDQNNS SSRESDESEH SCQPPAKKPR VIWTPMLHRE FLKAVKQIGD  180
DKAVPKKILE VMNIAGLTRD HVASHLQVSF CFVYLIFHNC TWL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A9e-15157207454ARR10-B
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_44120
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020207938.11e-138two-component response regulator ORR24
TrEMBLA0A151QRZ31e-166A0A151QRZ3_CAJCA; Two-component response regulator ARR2
STRINGGLYMA08G05165.14e-79(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14524517
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31920.12e-46response regulator 10