PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_44344
Common NameKK1_044035
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family WRKY
Protein Properties Length: 288aa    MW: 32462.9 Da    PI: 8.2352
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_44344genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY88.27.1e-28108166158
                    ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS CS
           WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnh 58 
                    ++Dgy+WrKYGqK+ k++  pr+Y+rC++a  Cp+kkkv+r+ +d+++++ tY geHnh
  C.cajan_44344 108 VKDGYQWRKYGQKVTKDNASPRAYFRCSMApICPAKKKVQRCIHDKSILVATYDGEHNH 166
                    58***************************99**************************** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.1E-27101167IPR003657WRKY domain
PROSITE profilePS5081123.858103169IPR003657WRKY domain
SuperFamilySSF1182905.49E-24104167IPR003657WRKY domain
SMARTSM007741.1E-31108168IPR003657WRKY domain
PfamPF031065.1E-23109166IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    Send to blast
MVVQLFNIPI IMDEKVETLK EELQRLREEN NTLRLMLEVL NSKCTKLETH VQETNKAKHE  60
GLSSSNQIGS VTVPILDTNK RPRLEFPTAK KPLQIFVRTH PKDDSLIVKD GYQWRKYGQK  120
VTKDNASPRA YFRCSMAPIC PAKKKVQRCI HDKSILVATY DGEHNHGAIH ESSSSTQKHN  180
HGVIHESSSS TPKGSPVVNK LPLTSIPNDK EAMNIDLALF GWSQTDTRHC EDVMQQKDQG  240
SNIKIEEYVS SLVKDPGFTL SLAEAVARTI TGQQKQQGLN LNLDLQEE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-181071661371WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_44344
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU3753491e-179EU375349.1 Glycine max transcription factor (WRKY63) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020206660.10.0probable WRKY transcription factor 40
RefseqXP_020206662.10.0probable WRKY transcription factor 40
TrEMBLA0A151QX950.0A0A151QX95_CAJCA; Putative WRKY transcription factor 40
STRINGGLYMA14G11920.11e-151(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF73983044
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.12e-41WRKY DNA-binding protein 40