PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_44447
Common NameKK1_044895
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 209aa    MW: 23490.4 Da    PI: 4.604
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_44447genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.22.2e-0647871055
                   HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                   ++R +++ ++f  L   +P       kK++K +iL kA  Y+++L+
  C.cajan_44447 47 KKRQQELTKRFLALSATIPGF-----KKMDKTSILDKASSYVRQLE 87
                   89******************8.....8*****************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.7853786IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.3E-64392IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.7E-114798IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.00E-54791No hitNo description
SuperFamilySSF474591.44E-1147104IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    Send to blast
MDSLISREVG DDVNEFSFDD EEFGFGGGDD EGDSFSETID PKMTDTKKRQ QELTKRFLAL  60
SATIPGFKKM DKTSILDKAS SYVRQLEQRV RELEQEVQSN ICSNNNGSTT SNEVNSNYHY  120
SEANEISPEV KVRVLQKDVL IIIHCEKQKG IMLKVLSYLE NINLSVVNSS VLRFGKSTLD  180
ITITAQMGDG YKMSVDELVK TLRVAILTQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_44447
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020207260.11e-146transcription factor bHLH18
TrEMBLA0A151QUY21e-151A0A151QUY2_CAJCA; Transcription factor bHLH19
STRINGGLYMA08G23020.18e-87(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1460568
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22760.13e-28bHLH family protein