PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_44595
Common NameKK1_044000
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family B3
Protein Properties Length: 166aa    MW: 19425 Da    PI: 8.0211
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_44595genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B345.41.5e-142711790
                   E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
             B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90
                   ++p +f+e++g+    +  l l++++g +W+++l  +k+ g++++++GWkeF++ + L  g  +vF+ +++s f
  C.cajan_44595  2 MFPERFVERYGE--GLPNSLFLKTPNGAEWRLNL--EKRNGKIWFEEGWKEFAEHHSLAHGHLLVFRCQRTSLF 71
                   579*******74..47778***************..9******************************6654555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5086314.142179IPR003340B3 DNA binding domain
SMARTSM010190.0029179IPR003340B3 DNA binding domain
CDDcd100171.29E-13277No hitNo description
SuperFamilySSF1019368.83E-18286IPR015300DNA-binding pseudobarrel domain
PfamPF023626.9E-12371IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.8E-19388IPR015300DNA-binding pseudobarrel domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    Send to blast
QMFPERFVER YGEGLPNSLF LKTPNGAEWR LNLEKRNGKI WFEEGWKEFA EHHSLAHGHL  60
LVFRCQRTSL FQVFILDMSA LEIDYPSERV EGEKASNNHG NRPPNDENLE YHRPGQKRKY  120
NLAVDFLPLY HLRSSTSIKV ENTVILSKEA LHHTDTKCKG IRFCCP
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_44595
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020206625.11e-112B3 domain-containing transcription factor VRN1
TrEMBLA0A151QXE61e-121A0A151QXE6_CAJCA; B3 domain-containing transcription factor VRN1 (Fragment)
STRINGGLYMA18G30790.17e-68(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9834369
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49475.19e-21B3 family protein