PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_45328
Common NameKK1_047766
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 225aa    MW: 25634.9 Da    PI: 9.5551
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_45328genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH391.4e-1262107555
                    HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    h + Er+RR++i ++f  L   +P +     kK +Ka++L +A++Y+++Lq
  C.cajan_45328  62 HIMSERKRRQDIAQKFIALSATIPGL-----KKINKASVLGEAINYMRQLQ 107
                    8999**********************.....9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.17657106IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.03E-1560118IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.2E-1061107IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.6E-1562117IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.42E-962111No hitNo description
SMARTSM003531.2E-1163112IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    Send to blast
MNDDSACTNA TIAAIGPKEE CYNSYLKSRE EESGSCYELE LEGREKSRGT KRARSSYETQ  60
YHIMSERKRR QDIAQKFIAL SATIPGLKKI NKASVLGEAI NYMRQLQQRI AMLEKGINNN  120
LSMKSLIITK SCETNLCTYY RANEVLPEVE ARGLEKEILI RIYCEKRKGI MIKLLALLKQ  180
VHLSIAYSTV LPFGNSFLNI IIIAQMSEKY KLSVKDLVMT LKQGF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16570ERKRRQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_45328
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_029126237.11e-163transcription factor bHLH19-like
TrEMBLA0A151QN791e-162A0A151QN79_CAJCA; Transcription factor bHLH19
STRINGGLYMA07G03081.11e-108(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14964813
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22760.11e-42bHLH family protein