PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_45406
Common NameKK1_042013
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 141aa    MW: 16118.4 Da    PI: 6.7861
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_45406genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.46e-093178455
                   HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                   +h+ +Er RR++iN+++  L+el+P +     k +  a +L   ++Y++sLq
  C.cajan_45406 31 SHSLAERVRREKINEKMRYLQELVPGC----YKSMGMAVMLDVIIDYVQSLQ 78
                   8*************************8....355999999999999999998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000834.42E-102582No hitNo description
SuperFamilySSF474593.4E-172595IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.5E-172689IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.2812777IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.1E-63178IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.5E-73383IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:2000488Biological Processpositive regulation of brassinosteroid biosynthetic process
GO:0005634Cellular Componentnucleus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 141 aa     Download sequence    Send to blast
GNKRKINNDR LKEKGNEVIH VRAKRGQATD SHSLAERVRR EKINEKMRYL QELVPGCYKS  60
MGMAVMLDVI IDYVQSLQQQ IEFLSMKLSA ASMYFDLSST EMDATEIMQR SASTHEIQEM  120
DGIGGEGYGG ICYFNPTWPL Y
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_45406
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020205295.11e-103transcription factor bHLH75
SwissprotA4D9981e-49BH075_ARATH; Transcription factor bHLH75
TrEMBLA0A151R2T11e-102A0A151R2T1_CAJCA; Transcription factor bHLH75 (Fragment)
STRINGXP_009797952.17e-65(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF148131112
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25330.13e-51bHLH family protein
Publications ? help Back to Top
  1. Khan M, et al.
    Interplay between phosphorylation and SUMOylation events determines CESTA protein fate in brassinosteroid signalling.
    Nat Commun, 2014. 5: p. 4687
    [PMID:25134617]
  2. Eremina M, et al.
    Brassinosteroids participate in the control of basal and acquired freezing tolerance of plants.
    Proc. Natl. Acad. Sci. U.S.A., 2016. 113(40): p. E5982-E5991
    [PMID:27655893]
  3. Pfannebecker KC,Lange M,Rupp O,Becker A
    Seed Plant-Specific Gene Lineages Involved in Carpel Development.
    Mol. Biol. Evol., 2017. 34(4): p. 925-942
    [PMID:28087776]