PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_45776
Common NameKK1_044544
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family MYB
Protein Properties Length: 311aa    MW: 35371.9 Da    PI: 9.205
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_45776genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.94.9e-082974346
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46
                     rWT++E +l+ +a + + ++   +W ++a+ ++ g+t  +++  ++ 
    C.cajan_45776 29 RWTPQENKLFENALAVYDKDtpdRWLKVAALIP-GKTVGDVIKQYRE 74
                     9********************************.******9999986 PP
2Myb_DNA-binding46.58.2e-15136180347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ +++ + k++G+g+W+ I+r + ++Rt+ q+ s+ qky
    C.cajan_45776 136 PWTKEEHRQFLMGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKY 180
                      8*******************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512939.8532580IPR017884SANT domain
SMARTSM007173.7E-82678IPR001005SANT/Myb domain
SuperFamilySSF466892.58E-112884IPR009057Homeodomain-like
PfamPF002492.5E-62974IPR001005SANT/Myb domain
CDDcd001676.90E-72975No hitNo description
PROSITE profilePS5129420.236129185IPR017930Myb domain
SuperFamilySSF466892.23E-17130184IPR009057Homeodomain-like
TIGRFAMsTIGR015574.5E-17132184IPR006447Myb domain, plants
SMARTSM007172.6E-13133183IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.604.9E-13133180IPR009057Homeodomain-like
PfamPF002493.7E-12136180IPR001005SANT/Myb domain
CDDcd001674.38E-11136181No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    Send to blast
MNRGIEVVLS PASYLQSSNW LFQESLGTRW TPQENKLFEN ALAVYDKDTP DRWLKVAALI  60
PGKTVGDVIK QYRELEEDVS VIESGFIPVP GYTTDSFTLE WVNNQGFDGF KQFYSVTGKR  120
GASTRPSEQE RKKGVPWTKE EHRQFLMGLK KYGKGDWRNI SRNFVTTRTP TQVASHAQKY  180
FIRQLSGGKD KKRSSIHDIT MVNLQETKSP SPESNKPPSP DHSVKDVNPP QSQRLSTTTM  240
VKQEYDWKMP CENVPMLFNS SNGNMFVTPL CGISSYGSKP LHEQHLFTGS LHGCQFGPYD  300
TIMQMQSMQN Q
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2cjj_A3e-172794875RADIALIS
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the dorsovental asymmetry of flowers. Promotes ventral identity. {ECO:0000269|PubMed:11937495, ECO:0000269|PubMed:9118809}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00296DAPTransfer from AT2G38090Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_45776
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311840.0KT031184.1 Glycine max clone HN_CCL_88 MYB/HD-like transcription factor (Glyma03g14440.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020207049.10.0transcription factor DIVARICATA
SwissprotQ8S9H71e-119DIV_ANTMA; Transcription factor DIVARICATA
TrEMBLA0A151QW640.0A0A151QW64_CAJCA; Myb-like protein J
STRINGGLYMA03G14440.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF46634162
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.11e-116MYB family protein
Publications ? help Back to Top
  1. Galego L,Almeida J
    Role of DIVARICATA in the control of dorsoventral asymmetry in Antirrhinum flowers.
    Genes Dev., 2002. 16(7): p. 880-91
    [PMID:11937495]
  2. Almeida J,Rocheta M,Galego L
    Genetic control of flower shape in Antirrhinum majus.
    Development, 1997. 124(7): p. 1387-92
    [PMID:9118809]