PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_47691
Common NameKK1_043211
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ZF-HD
Protein Properties Length: 199aa    MW: 21826.6 Da    PI: 9.6787
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_47691genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer98.64.6e-31859456
    ZF-HD_dimer  4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRre 56
                    rYkeClkNhA+ +Ggha+DGCgEfm++ g+egt +alkCaAC+CHRnFHR+e
  C.cajan_47691  8 GRYKECLKNHAVGIGGHALDGCGEFMAA-GSEGTLDALKCAACNCHRNFHRKE 59
                   69*************************9.999********************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD1257744.0E-23459IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
TIGRFAMsTIGR015663.0E-29959IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PfamPF047701.7E-28959IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profilePS5152327.2781059IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Gene3DG3DSA:1.10.10.602.1E-32123198IPR009057Homeodomain-like
SuperFamilySSF466891.22E-20126197IPR009057Homeodomain-like
TIGRFAMsTIGR015658.7E-28136192IPR006455Homeodomain, ZF-HD class
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    Send to blast
MARNSGKGRY KECLKNHAVG IGGHALDGCG EFMAAGSEGT LDALKCAACN CHRNFHRKEG  60
GEGPYLMPFQ QRRHQPPHFS AYYRAPAGYL HVAGQQQRGG PATLALPSTS GAGGGAQSPR  120
EDQEDVSDPC GGGGPKKRFR TKFTQEQKDK MLGFAEKLGW RIQKHDENVV QEFCSETGVQ  180
RHVLKVWMHN NKHTLGKKP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wh7_A2e-271371941875ZF-HD homeobox family protein
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_47691
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020206061.11e-148zinc-finger homeodomain protein 1
SwissprotA2Z2593e-78ZHD1_ORYSI; Zinc-finger homeodomain protein 1
TrEMBLA0A151QZQ51e-146A0A151QZQ5_CAJCA; ZF-HD homeobox protein At4g24660 family
STRINGGLYMA18G21520.21e-106(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20634253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.12e-70homeobox protein 22