PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_48027
Common NameKK1_044139
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family MYB
Protein Properties Length: 394aa    MW: 42535.2 Da    PI: 6.586
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_48027genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.31.5e-17121166147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg W + Ed +l+++v+q+G+ +W++Ia++++ gR++k+c++rw++ 
    C.cajan_48027 121 RGHWRPAEDAKLKELVAQFGPQNWNSIAEHLQ-GRSGKSCRLRWFNQ 166
                      899*****************************.***********996 PP
2Myb_DNA-binding52.31.3e-16173216146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      r+++T+ E+e+l+ a+k +G++ W+ I+r ++ gRt++ +k++w+ 
    C.cajan_48027 173 RKAFTEAEEERLLAAHKVYGNK-WAMISRLFP-GRTDNAVKNHWHV 216
                      789*******************.*********.***********96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129424.196116171IPR017930Myb domain
SMARTSM007171.3E-14120169IPR001005SANT/Myb domain
SuperFamilySSF466894.49E-28121214IPR009057Homeodomain-like
PfamPF002495.4E-17121166IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.602.0E-26122174IPR009057Homeodomain-like
CDDcd001671.21E-13124165No hitNo description
PROSITE profilePS5129419.491172222IPR017930Myb domain
SMARTSM007176.7E-14172220IPR001005SANT/Myb domain
PfamPF002497.3E-13173215IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.603.1E-19175220IPR009057Homeodomain-like
CDDcd001676.45E-11175215No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0051782Biological Processnegative regulation of cell division
GO:0071367Biological Processcellular response to brassinosteroid stimulus
GO:0005634Cellular Componentnucleus
GO:0001046Molecular Functioncore promoter sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 394 aa     Download sequence    Send to blast
MSNSLNLNNG GFGFCADMNI FPSAPDPSAS SSSSSLLGLQ PSLGSNTFGV MTHATAGTES  60
ESSDAPFQFQ ILNSSVFQPQ EEDEESFGIE NMSLSVKPGE EVDAGNSSGS GKNKQTKLCA  120
RGHWRPAEDA KLKELVAQFG PQNWNSIAEH LQGRSGKSCR LRWFNQLDPR INRKAFTEAE  180
EERLLAAHKV YGNKWAMISR LFPGRTDNAV KNHWHVIMAR MQREKSCVYR RRKPSVQTLS  240
KDMTLPNNAA SESTISSTII DESASTATDL SLTPSSATPT TPMMPSHNPG PVHNHQAFGE  300
LMGVSGESMT PTRDVGFGKF FSAWKGSCNA GHMGKLKGVV DQSHYSDSNS SEVSVSESVA  360
TNRATNLSIS GESENVGDNK ANMPFIDFLG VGAT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A5e-331212207106B-MYB
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00516DAPTransfer from AT5G17800Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_48027
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020206745.10.0transcription factor MYB54
TrEMBLA0A151QX720.0A0A151QX72_CAJCA; Transcription factor MYB44
STRINGXP_007151515.11e-167(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF23034243
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17800.13e-68myb domain protein 56