PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_48124
Common NameKK1_044858
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family Trihelix
Protein Properties Length: 162aa    MW: 18053.3 Da    PI: 10.1519
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_48124genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix57.34e-1821103186
       trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                    +W++  v  L+ea++ ++   +r+klk+++We+v++++ ++  ++++++qCk+k e+++kry+ + + +  +    ss++p++++l+
  C.cajan_48124  21 EWSEGAVSRLLEAYEAKWVLRNRAKLKGHDWEDVARHVtSRANCTKTSTQCKNKVESMKKRYRSESAAADHG----SSSWPFYSRLD 103
                    5*************************************788899***********************99986....779*****997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138379.1E-2219103No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    Send to blast
MKEECVRKVG FGRGERVKRD EWSEGAVSRL LEAYEAKWVL RNRAKLKGHD WEDVARHVTS  60
RANCTKTSTQ CKNKVESMKK RYRSESAAAD HGSSSWPFYS RLDLLLRGTA PPPPPPPPQS  120
PVEPSQPPPA APSLANAQNS HGSYGYGVHD KLAKVNSNAH FF
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_48124
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1604553e-75AC160455.26 Glycine max cultivar Williams 82 clone gmw2-10n21, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020207224.11e-112trihelix transcription factor ASIL1
TrEMBLA0A151QV201e-117A0A151QV20_CAJCA; Uncharacterized protein
STRINGGLYMA13G26550.12e-72(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49943350
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54390.12e-48sequence-specific DNA binding transcription factors