PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_48299
Common NameKK1_049836
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family MYB_related
Protein Properties Length: 84aa    MW: 9683.2 Da    PI: 12.1339
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_48299genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.83e-093371247
                     HHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding 12 lvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     ++ + +q+G g Wk+I++++g ++++ q++s+ +k+
    C.cajan_48299  3 FLIGLQQHGIGKWKAISERIG-TKSRTQVVSHARKF 37
                     666899***************.***********998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466893.98E-8142IPR009057Homeodomain-like
CDDcd001671.29E-6138No hitNo description
PROSITE profilePS5129313.027142IPR017884SANT domain
Gene3DG3DSA:1.10.10.600.001232IPR009057Homeodomain-like
PfamPF002491.6E-6336IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 84 aa     Download sequence    Send to blast
RLFLIGLQQH GIGKWKAISE RIGTKSRTQV VSHARKFFAR QNAAPEKKKR RSIHDMVLED  60
MNIVIDRTNA VRGPQNVTAR HPDR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14650KKKRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_48299
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020209603.12e-54transcription factor MYBS2, partial
TrEMBLA0A151UGG66e-55A0A151UGG6_CAJCA; Myb-like protein J (Fragment)
STRINGXP_007152391.12e-15(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF13860414
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04760.14e-16MYB family protein