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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | CA00g11180 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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| Family | G2-like | ||||||||
| Protein Properties | Length: 250aa MW: 28845.8 Da PI: 9.4129 | ||||||||
| Description | G2-like family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | G2-like | 21.8 | 4.3e-07 | 96 | 140 | 5 | 47 |
G2-like 5 rWtpeLHerFveaveq..LGGsekAtPktilelmkvkgLtlehvk 47
Wt LH +F++ v++ L Pk ile+m+v+ Lt +v+
CA00g11180 96 IWTDYLHGKFMKFVQHyiLMEYVDCYPKDILEVMDVPNLTTMQVA 140
5**************95565667899**************99986 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| SuperFamily | SSF46689 | 4.84E-5 | 92 | 140 | IPR009057 | Homeodomain-like |
| Gene3D | G3DSA:1.10.10.60 | 4.5E-7 | 95 | 140 | IPR009057 | Homeodomain-like |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0003677 | Molecular Function | DNA binding | ||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 250 aa Download sequence Send to blast |
ICDEHDELLG KKDWDKGAYL YNKKPIYGGI LKYLWQFVLR EKIKREKVSE GSEKNEDLMH 60 TENDVGSNGK HKLKRKRGRK TLIETNVGEG QRSTNIWTDY LHGKFMKFVQ HYILMEYVDC 120 YPKDILEVMD VPNLTTMQVA NLFLFSFFLN TSQKCCTKNW RVSEERKSVP YSSGQASSSG 180 SQHLLFFKSF GTMPRLHADV SNHQHNPNQV QRGPGFLLPT QSTNTIFSRG ESSIQQLYHP 240 QFQVTTPLT* |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 69 | 78 | KHKLKRKRGR |
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| TrEMBL | A0A2G3BJ67 | 6e-95 | A0A2G3BJ67_CAPCH; Uncharacterized protein | ||||
| Orthologous Group ? help Back to Top | |||
|---|---|---|---|
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Asterids | OGEA813 | 23 | 84 |
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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