PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

CA00g29950

Organism

Capsicum annuum

Taxonomic ID

4072

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Nin-like

Protein Properties

Length: 181aa MW: 20811.6 Da PI: 8.3793

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
CA00g29950	genome	PEP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	53.3	5.2e-17	94	142	4	52
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 i+ e l+++F + +dAAk+L v++ + KriCR+y+I+RWPh k +++ CA00g29950 94 GITREILEEHFGMCPQDAAKSLRVSVPTFKRICREYNISRWPHHKTRKV 142 589999***************************************9986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	12.457	79	164	IPR003035	RWP-RK domain
Pfam	PF02042	5.0E-17	95	142	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 181 aa Download sequence Send to blast
MWMKHMITLK LKRTPVKLCN LSHFEQENVE TDYTCSARSN DKVEHSDIAR CGRQSVEAES 60 INGESNWVSR ETTNILRIDS QKNSSKQRIL KDYGITREIL EEHFGMCPQD AAKSLRVSVP 120 TFKRICREYN ISRWPHHKTR KVYPHVSQGI SLHGVEPYEG DQQCPNLSQE KGTQIDLVVV 180 *

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016570904.1	1e-134	PREDICTED: protein NLP2-like
Refseq	XP_016570905.1	1e-134	PREDICTED: protein NLP2-like
TrEMBL	A0A1U8GID2	1e-133	A0A1U8GID2_CAPAN; protein NLP2-like
STRING	XP_009603064.1	6e-47	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA10406	5	15

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	9e-11	Nin-like family protein