PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA00g66680
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 179aa    MW: 21076.7 Da    PI: 6.0328
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA00g66680genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM41.83.4e-1381343128
         NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevik.evdiykv..ePwdLp.k...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                  GfrFhPtd e +  +L+k +++++++ + +i+ ++d+y++  ePw++  +   + +  ++++y ++ ++k          + + g Wk + + k+v++
  CA00g66680   8 SGFRFHPTDTEGL-TFLQKFMAKQEINYSGFITiNIDVYDSeeEPWKIYsRgvpRGA-ADDSLYRYFITKK----------SSNLGNWKLQDEGKPVHR 94 
                 7**********99.9**********9998886526699987558****733443222.3334443333222..........234699**********99 PP

         NAM  95 k...kgelvglkktLvfy...kgrapkgektdWvmheyrl 128
                     ++ ++g kk + +    ++++++     W+m+ey+l
  CA00g66680  95 DsssSTVVIGYKKKMRYMvnnNEEHREDDGHYWLMKEYKL 134
                 86555566**********55433444445678******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100516.5726157IPR003441NAC domain
SuperFamilySSF1019411.44E-176157IPR003441NAC domain
PfamPF023654.1E-118134IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    Send to blast
MEQRVVRSGF RFHPTDTEGL TFLQKFMAKQ EINYSGFITI NIDVYDSEEE PWKIYSRGVP  60
RGAADDSLYR YFITKKSSNL GNWKLQDEGK PVHRDSSSST VVIGYKKKMR YMVNNNEEHR  120
EDDGHYWLMK EYKLSNVMLH QFDDDYRDYV LYAIKKKFIE TCSSEMDNVS EEFGAIQI*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016560607.16e-62PREDICTED: protein NTM1-like 9
TrEMBLA0A2G2Z7131e-122A0A2G2Z713_CAPAN; Uncharacterized protein
STRINGXP_009631312.14e-49(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22191254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24430.22e-07NAC domain containing protein 38