PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA00g67620
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 191aa    MW: 22597.1 Da    PI: 9.7573
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA00g67620genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM23.91.2e-071412712128
         NAM  12 eelvveyLkkkvegkkleleev.ikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkkt 105
                 +  +++ L k v gk+++  ++ +++vd    +  + P+++  + +++ +e+yf + +d k+a  kr +r+   g+W    + k++++++++++g  k+
  CA00g67620  14 Q-KIMNNLVKYVMGKPFPDRHTvMEDVDerygMRGFTPSEIF-ESAKGPRELYFITFQDLKKA--KRFTRK--VGTWWPEKRVKPIYDADKRHMGNIKI 106
                 3.3446688888888855433336666544448899*****6.5556789********99976..477774..68**************8888887776 PP

         NAM 106 Lvfy.kgrapkgektdWvmheyrl 128
                   +y +g+++    ++  m ey l
  CA00g67620 107 SWYYyTGDKEP---SECHMREYYL 127
                 66661554433...6778999876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100510.1622149IPR003441NAC domain
SuperFamilySSF1019411.11E-813148IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    Send to blast
MAKYSLRFPI EKDQKIMNNL VKYVMGKPFP DRHTVMEDVD ERYGMRGFTP SEIFESAKGP  60
RELYFITFQD LKKAKRFTRK VGTWWPEKRV KPIYDADKRH MGNIKISWYY YTGDKEPSEC  120
HMREYYLSSK YVPQNKVERN HVVVTLVTKT IKIPRAADEE MMDTTQSNEQ QIMQSLQLLQ  180
LQDSPILTKP *
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027774642.12e-45uncharacterized protein LOC114078274
TrEMBLA0A2G3DJJ91e-122A0A2G3DJJ9_CAPCH; Uncharacterized protein
STRINGPGSC0003DMT4000690255e-44(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA14078510