PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA00g67910
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 248aa    MW: 28387.8 Da    PI: 10.7686
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA00g67910genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.67.2e-19133183255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+++AeIrdp    +rkr +lg++ t e+Aa a+++a+ k++g
  CA00g67910 133 RYRGVRRRP-WGKFAAEIRDPDR--RRKRLWLGTYETSEDAALAYDQAAFKMHG 183
                 7********.**********833..46**************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003803.5E-37133197IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.0E-31133192IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-23133192IPR016177DNA-binding domain
PROSITE profilePS5103224.447133191IPR001471AP2/ERF domain
PfamPF008479.0E-15133183IPR001471AP2/ERF domain
PRINTSPR003676.0E-10134145IPR001471AP2/ERF domain
CDDcd000181.16E-23141193No hitNo description
PRINTSPR003676.0E-10157173IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    Send to blast
MIGQAYKIIN RENINPSNSS TLHSKTPVTK IARNYSSKQN FIRAKKMNPF DQNCSFSEIS  60
SDFSKSFSPM NSSNATPNNS PSSSFDSFLW DENINEETMY LQSHKKPKPG HKDKMQGPRE  120
EAREESTRQD WRRYRGVRRR PWGKFAAEIR DPDRRRKRLW LGTYETSEDA ALAYDQAAFK  180
MHGSKARLNF PHLIGPNMPE PPRVTARRCS RSLEPKPPSS SPSSENGTRK RNIDVINSIA  240
KAKSFWS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A1e-24132191160ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1137157RRRPWGKFAAEIRDPDRRRKR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016557636.11e-148PREDICTED: ethylene-responsive transcription factor 2-like
TrEMBLA0A1U8FEH81e-146A0A1U8FEH8_CAPAN; ethylene-responsive transcription factor 2-like
STRINGXP_009609536.11e-68(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.14e-28ethylene-responsive element binding factor 13