PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA00g72000
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family TALE
Protein Properties Length: 667aa    MW: 73756.3 Da    PI: 4.9622
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA00g72000genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox29.21.6e-094324691954
                 HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
    Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                 Fe   ++yp+ ++++ LA+++gLt +qV++WF N R +
  CA00g72000 432 FEHflHPYPKDSDKTMLARQTGLTRSQVSNWFINARVR 469
                 554459******************************88 PP
2BELL126.88.1e-41294365172
        BELL   1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                 e+qe+q+k +kLls+l+e+d+rY+qy++q+q+v+ssF++vag g+akpYt+lAl++iSrhFrcL+dai++qi
  CA00g72000 294 EKQEMQNKLTKLLSMLDEIDRRYRQYYHQMQIVVSSFDVVAGDGAAKPYTALALQTISRHFRCLRDAICDQI 365
                 689********************************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005749.3E-61216363IPR006563POX domain
PfamPF075261.6E-50222361IPR006563POX domain
PROSITE profilePS5007112.26410473IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.602.5E-28412485IPR009057Homeodomain-like
CDDcd000863.91E-12413474No hitNo description
SMARTSM003891.6E-9413477IPR001356Homeobox domain
SuperFamilySSF466896.42E-17414480IPR009057Homeodomain-like
PfamPF059201.7E-18430469IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 667 aa     Download sequence    Send to blast
MATYFPSPNN QRDAETFQYL RQSLPDSYSE ASNAPENMMV FMNYSSSGTY SDMLAGTSQQ  60
QNSCIDIPPV GATCSNTSQE EILSNLGGSQ MGIQDFSAWR DSRNEMLAVH SMGAADTVLQ  120
VAQNVPGQGL SLSLGSNIPS AIGISHVRSQ NPNHGFMSFL SPASSVPGEG SGVNVSFGGD  180
DNSQPKQQTN ADYLPPDYPG SNSDVMKGYN SPYGTSSIAR TIPSSKYLKA AQYLLDEVVS  240
VRKAIKEQTS KKELRKDSRE SDGDSKNKSS DPSANGSSNP HESKNNQSEL SATEKQEMQN  300
KLTKLLSMLD EIDRRYRQYY HQMQIVVSSF DVVAGDGAAK PYTALALQTI SRHFRCLRDA  360
ICDQIRASRR SLGEQDASEN SKAIGISRLR FVDQHIRQQR ALQQLGMMQQ HAWRPQRGLP  420
ETSVSVLRAW LFEHFLHPYP KDSDKTMLAR QTGLTRSQVS NWFINARVRL WKPMVEEMYK  480
EEAGDAEIDS NSSSEIASRR ATDGSKVEER EEMHQNAASE FEQYNNGQIL ESKSNHEADV  540
EMEGANNVET QSQSGMENQR DEPPPTMDNC TPFQDAFVQS NNRFSEFGSF GSGNVLPHGV  600
SLTLGLQQGE ESNLPMSIET HVSYVPLRAD DIYSTAPPTM VPETAEFNCL DSGNRQHPFW  660
LLPSAT*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A2e-16419477563Homeobox protein Meis2
3k2a_B2e-16419477563Homeobox protein Meis2
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU6863790.0EU686379.1 Solanum etuberosum BEL30 protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016539788.10.0PREDICTED: BEL1-like homeodomain protein 6
TrEMBLA0A1U8DXN40.0A0A1U8DXN4_CAPAN; BEL1-like homeodomain protein 7
TrEMBLA0A2G2XWS00.0A0A2G2XWS0_CAPAN; BEL1-like homeodomain protein 6
STRINGPGSC0003DMT4000795170.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA102052226
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34610.21e-131BEL1-like homeodomain 6