PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA00g73220
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 179aa    MW: 20852.5 Da    PI: 6.6797
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA00g73220genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM39.32e-1281343128
         NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv..ePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                  GfrFhPtd   +  +L+k +++++++ + +  +++d+y++  +Pw++ +    +  a ++++y ++ ++k          + + g Wk + + k+v++
  CA00g73220   8 SGFRFHPTDTKGL-TFLQKFMAKQEMNDSGFiTTNIDVYDSeeKPWKIYSrgvpC-GAADDSLYRYFITKK----------SSNLGNWKLQDEGKPVHR 94 
                 7**********99.89*********99988834556***98546****7334432.334444543333222..........234699**********99 PP

         NAM  95 k...kgelvglkktLvfy...kgrapkgektdWvmheyrl 128
                     ++ ++g kk + +    ++++++     W+m+ey+l
  CA00g73220  95 DsssSTVVIGYKKKMRYMvnnNEEHREDDGHYWLMKEYKL 134
                 86555566**********55433444445678******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019419.02E-175157IPR003441NAC domain
PROSITE profilePS5100515.9426157IPR003441NAC domain
PfamPF023652.7E-108134IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    Send to blast
MLQRGVSSGF RFHPTDTKGL TFLQKFMAKQ EMNDSGFITT NIDVYDSEEK PWKIYSRGVP  60
CGAADDSLYR YFITKKSSNL GNWKLQDEGK PVHRDSSSST VVIGYKKKMR YMVNNNEEHR  120
EDDGHYWLMK EYKLSNVMLH QFDDDYRDYV LYAIKKKFIE TCSSEMDNVS EEFGAIQI*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016560607.13e-65PREDICTED: protein NTM1-like 9
TrEMBLA0A2G2WGP71e-119A0A2G2WGP7_CAPBA; Uncharacterized protein
STRINGXP_009631312.16e-52(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22191254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G17730.14e-07NAC domain containing protein 57