PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA00g77770
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 364aa    MW: 40286 Da    PI: 4.4262
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA00g77770genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.18.3e-053123511054
                 HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 r R d+i++ ++ L+e++P      ++K s + +L +A++Y++sL
  CA00g77770 312 RLRKDKIRETISILQEIIPRG----KGKDS-MVVLDEAIHYLRSL 351
                 7799****************7....68888.99**********99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.87302351IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.33E-6312358IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.3E-5312358IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000839.86E-4312352No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    Send to blast
MEKDFVSSFH HQYSDLQLAH LNFSYPQFDI GQQNSFPTYM IPQSNEVPTN GNSPFFTFSG  60
LPESNASWPT EPCNWLYYSP QFYQGFNPVS TTLPKEKLAP RAPENLGGYK HPNGGTASAQ  120
KRFLVFDQSG DQTTLIYNSP NGTPVQCPAS LNPRAPALYN SSKEDPEIKT NEASPFGHFF  180
DKEYYEDNNK DDVESEMHED TEELNALLYS DDDNDCSEDD EETSTGHSPS TMTARDLPEL  240
SDERGEEVAS SVGSTKRHKL LDGSYDAPEI RDTATSTKAY TCSNLEDDAQ SSCANGLEQD  300
SGAPGSPSGK KRLRKDKIRE TISILQEIIP RGKGKDSMVV LDEAIHYLRS LKVKAKSLGL  360
DSL*
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754430.0HG975443.1 Solanum pennellii chromosome ch04, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016569093.10.0PREDICTED: transcription factor bHLH143-like
RefseqXP_016569094.10.0PREDICTED: transcription factor bHLH143-like
TrEMBLA0A1U8GK250.0A0A1U8GK25_CAPAN; transcription factor bHLH143-like
TrEMBLA0A1U8GLY20.0A0A1U8GLY2_CAPAN; Uncharacterized protein
STRINGXP_009597068.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA494255
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20180.17e-08phytochrome interacting factor 3-like 5