PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

CA00g79730

Organism

Capsicum annuum

Taxonomic ID

4072

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Nin-like

Protein Properties

Length: 514aa MW: 57602.3 Da PI: 7.2181

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
CA00g79730	genome	PEP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	56.8	4.3e-18	105	151	4	50
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkik 50 ++sledl+++F ++ ++AA +L+v+ ++ KriCR++GI+RWP+ kik CA00g79730 105 SVSLEDLKEQFGKKREEAAESLNVSISTFKRICREHGISRWPSTKIK 151 689*******************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	14.186	89	174	IPR003035	RWP-RK domain
Pfam	PF02042	1.7E-18	106	151	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 514 aa Download sequence Send to blast
MLSMETKSEN PVCGKPVQIV DESPKFQCMQ LDAKCTAEES PLHIVPSRGD CALPVPFQQR 60 SITEHVNLKR KVDTGPSGQD VTIFELCNKQ KINKKYKKTW RIGDSVSLED LKEQFGKKRE 120 EAAESLNVSI STFKRICREH GISRWPSTKI KRERLLLSSL SCNGTDRVAA NTQMRITKGL 180 TSLASTFSVK SNQQKSQSSN LSVNNEKGTS LNGNLLEKNE DGDRENIMIQ VEDSSNQELV 240 YIPQEFRPAC DSLIPDVPTI LSRLPRERMP AEDATQLISS APGQQGELIA RHLGKERFKC 300 DLSVEDSRNV SEPIQLMYTL SSTCHQGNAI VDSNHMEVQP LLESVPTQPL NSFSCNENTA 360 KNTKLLFNNL IVLTLEDLID HENETSITKA LPTLADNLSF SLKNKPKKYL NSQSIFMHSC 420 IAGDAEKEKI RDLAETSVKD EESLNVRYEE LKRKEQELRA QLEAVQKETA GIAEQRNEKS 480 KQTKHLVSLA EEKTASSTKE KHMMKIATTK LNN*

Sequence ? help Back to Top

Protein Sequence Length: 514 aa Download sequence Send to blast

MLSMETKSEN PVCGKPVQIV DESPKFQCMQ LDAKCTAEES PLHIVPSRGD CALPVPFQQR  60
SITEHVNLKR KVDTGPSGQD VTIFELCNKQ KINKKYKKTW RIGDSVSLED LKEQFGKKRE  120
EAAESLNVSI STFKRICREH GISRWPSTKI KRERLLLSSL SCNGTDRVAA NTQMRITKGL  180
TSLASTFSVK SNQQKSQSSN LSVNNEKGTS LNGNLLEKNE DGDRENIMIQ VEDSSNQELV  240
YIPQEFRPAC DSLIPDVPTI LSRLPRERMP AEDATQLISS APGQQGELIA RHLGKERFKC  300
DLSVEDSRNV SEPIQLMYTL SSTCHQGNAI VDSNHMEVQP LLESVPTQPL NSFSCNENTA  360
KNTKLLFNNL IVLTLEDLID HENETSITKA LPTLADNLSF SLKNKPKKYL NSQSIFMHSC  420
IAGDAEKEKI RDLAETSVKD EESLNVRYEE LKRKEQELRA QLEAVQKETA GIAEQRNEKS  480
KQTKHLVSLA EEKTASSTKE KHMMKIATTK LNN*

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016566393.1	0.0	PREDICTED: uncharacterized protein LOC107864519 isoform X1
Refseq	XP_016566396.1	0.0	PREDICTED: uncharacterized protein LOC107864519 isoform X4
TrEMBL	A0A2G2ZU06	0.0	A0A2G2ZU06_CAPAN; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA15528	4	4

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	5e-11	NIN like protein 7