PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA00g86900
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 162aa    MW: 18498.2 Da    PI: 7.3418
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA00g86900genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP233.11.4e-101964554
         AP2  5 GVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54
                GVr +k +g++ AeI++p +   +k ++lg+f tae+A k ++  ++++e
  CA00g86900 19 GVRKRK-NGKFCAEIKHPLN---KKMIWLGTFVTAEDASKNYESKKLEFE 64
                9**999.8*********743...5******************99988876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103212.9321676IPR001471AP2/ERF domain
PfamPF008473.4E-41864IPR001471AP2/ERF domain
SuperFamilySSF541712.75E-101863IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.6E-141963IPR001471AP2/ERF domain
CDDcd000188.09E-131963No hitNo description
SMARTSM003806.1E-51970IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    Send to blast
MKSYKRISKN TCVRLYPIGV RKRKNGKFCA EIKHPLNKKM IWLGTFVTAE DASKNYESKK  60
LEFEELVMTK RAKNGQISEK SDQESCVTDE FLEKSSMSVD ENTNTSNGVE ESEEELMMGT  120
WVKISKNQEV KYSHKLGVPI VDNYGFLLGE FSVLDDLSIY M*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015162709.11e-65PREDICTED: ethylene-responsive transcription factor ERF119-like
TrEMBLA0A2G2V6C61e-104A0A2G2V6C6_CAPBA; Ethylene-responsive transcription factor
STRINGPGSC0003DMT4000868144e-65(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA50751534
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.26e-16ERF family protein