PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

CA00g89360

Organism

Capsicum annuum

Taxonomic ID

4072

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

GeBP

Protein Properties

Length: 86aa MW: 9408.01 Da PI: 10.6072

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
CA00g89360	genome	PEP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	32.1	3.2e-10	2	51	40	97
DUF573 40 fvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 ++k++++++vsksql++Kir LKkKf + v+ g+ p f +fe+s++iWg CA00g89360 2 IIKGKLHADVSKSQLSDKIRMLKKKFMTSVEY---GEVPGFL-----LVFEYSNQIWG 51 689************************99988...8888776.....47888888887 PP

Sequence ? help Back to Top
Protein Sequence Length: 86 aa Download sequence Send to blast
MIIKGKLHAD VSKSQLSDKI RMLKKKFMTS VEYGEVPGFL LVFEYSNQIW GAPSNNVVKE 60 NVSNSANGKA KKAVTVVVKK SAEHK*

Functional Description ? help Back to Top
Source	Description
UniProt	May act as a transcriptional regulator. Binds specifically to the B-box motif, a promoter element that is required for the tuber-specific and sucrose inducible expression of the patatin gene. {ECO:0000269\|PubMed:12028578}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016580681.1	2e-27	PREDICTED: neurofilament heavy polypeptide-like
Swissprot	Q94IK2	4e-25	STK_SOLTU; STOREKEEPER protein
TrEMBL	A0A2G2XUM3	6e-54	A0A2G2XUM3_CAPAN; Uncharacterized protein
STRING	PGSC0003DMT400067363	3e-24	(Solanum tuberosum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2369	20	41